aggregateByAgeGroups    Aggregate population counts into age groups
contactMatrixAgeSchool
                        Calculate a contact matrix for age groups and
                        schools
contactMatrixPolymod    Calculate a contact matrix for age groups based
                        on Polymod contact survey data
contactMatrixPropPref   Calculate group contact matrix with
                        proportional mixing and preferential mixing
                        within group
finalsize               Calculate final outbreak size or distribution
                        of a multigroup transmission model for a given
                        basic reproduction number, contact/transmission
                        assumptions, and initial conditions
getCensusData           Get Census Population Data by Age and County
getCensusDataPath       Get path to example census data file
getCityData             Get City Population Data by Age
getFinalSizeAnalytic    Calculate final size of outbreak: the total
                        number of infections in each group, by solving
                        the analytic final size equation
getFinalSizeDist        Estimate the distribution of final outbreak
                        sizes by group using stochastic simulations of
                        multi-group model
getFinalSizeDistEscape
                        Estimate the distribution of final outbreak
                        sizes by group using a hybrid model: stochastic
                        simulations for smaller-sized outbreaks and
                        deterministic ordinary differential equation
                        model for "escaped" outbreaks
getFinalSizeODE         Calculate outbreak final size, the total number
                        of infections in each group, by numerically
                        solving the multi-group ordinary differential
                        equation
getSizeAtTime           Calculate outbreak size at a given time
getStateFIPS            Get state FIPS code by state name
listCounties            List available counties for a state
odeSIR                  Ordinary differential equation function for
                        multi-group susceptible-infectious-removed
                        (SIR) model used as "func" argument passed to
                        the ode() function from deSolve package
run_my_app              Runs the shiny app
transmissionRates       Calculate transmission rate matrix for
                        multi-group model with specified R0
vaxrepnum               Calculate reproduction number for a multigroup
                        model with a given state of vaccination and
                        immunity
