R: Modern Measures of Population Differentiation

# Modern Measures of Population Differentiation

## Documentation for package ‘mmod’ version 1.3.3

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS

## Help Pages

mmod-package | Modern Measures of Differentiation
as.genind.DNAbin | as.genind.DNAbin
chao_bootstrap | Produce bootstrap samples from each subpopulation of a genind object
diff_stats | Calculate differentiation statistics for a genind object
diff_test | An exact test of population differentiation for genind objects
dist.codom | Calculate distance between individual for co-dominant locus
D_Jost | Calculate Jost's D
Gst_Hedrick | Calculate Nei's Gst using estimators for Hs and Ht
Gst_Nei | Calculate Nei's Gst using estimators for Hs and Ht
harmonic_mean | Harmonic mean
jacknife_populations | Create jacknife samples of a genind object by population
mmod | Modern Measures of Differentiation
pairwise_D | Calculates pairwise values of Jost's D
pairwise_Gst_Hedrick | Calculates pairwise values of Hedrick's G'st
pairwise_Gst_Nei | Calculates pairwise values of Nei's Gst
Phi_st_Meirmans | Calculate Phi_st from a genind object
rgenotypes | Randomly create genotypes
summarise_bootstrap | Apply a differentiation statistic to a bootstrap sample