Package: microbiomeMQC
Type: Package
Title: Calculate 4 Key Reporting Measures
Version: 1.0.2
Maintainer: Jacob Dehinsilu <jacobdehinsilu@outlook.com>
Description: Perform calculations for the WHO International Reference Reagents for the microbiome. Using strain, species or genera abundance tables generated through analysis of 16S ribosomal RNA sequencing or shotgun sequencing which included a reference reagent. This package will calculate measures of sensitivity, False positive relative abundance, diversity, and similarity based on mean average abundances with respect to the reference reagent.
License: GPL-3
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.3
Imports: readxl, vegan
Suggests: testthat, knitr, rmarkdown
VignetteBuilder: knitr
Authors@R: c(person(given = "Jacob",
                      family = "Dehinsilu",
                      role = c("aut", "cre"),
                      email = "jacobdehinsilu@outlook.com",
                      comment = c(ORCID = "0000-0001-9041-970X")),
               person(given = "Ravneet",
                      family = "Bhuller",
                      role = "aut"))
NeedsCompilation: no
Packaged: 2024-09-13 00:02:10 UTC; Jacob
Author: Jacob Dehinsilu [aut, cre] (<https://orcid.org/0000-0001-9041-970X>),
  Ravneet Bhuller [aut]
Depends: R (>= 3.5.0)
Repository: CRAN
Date/Publication: 2024-09-16 07:20:02 UTC
Built: R 4.6.0; ; 2026-04-29 04:54:43 UTC; unix
