microPop-package	microPop-package
Acetogens	Acetogens
applyTraitTradeOffs	applyTraitTradeOffs
assignNAsToMFGs	assignNAsToMFGs
assignStrainTraits	assignStrainTraits
Bacteroides	Bacteroides
ButyrateProducers1	ButyrateProducers1
ButyrateProducers2	ButyrateProducers2
ButyrateProducers3	ButyrateProducers3
checkResInfo	checkResInfo
checkSolution	checkSolution
checkStoichiom	checkStoichiom
combineGrowthLimFunc	combineGrowthLimFuncDefault
combineGrowthLimFuncDefault	combineGrowthLimFuncDefault
combinePathsFunc	combinePathsFuncDefault
combinePathsFuncDefault	combinePathsFuncDefault
convertFlowsToMoles	convertFlowsToMoles
convertStatesToMoles	convertStatesToMoles
createDF	createDF
derivsDefault	derivsDefault
entryRateFunc	entryRateFuncDefault
entryRateFuncDefault	entryRateFuncDefault
extraGrowthLimFunc	extraGrowthLimFuncDefault
extraGrowthLimFuncDefault	extraGrowthLimFuncDefault
getAllResources	getAllResources
getGroupName	getGroupName
getKeyRes	getKeyRes
getNonBoostFrac	getNonBoostFrac
getNumPaths	getNumPaths
getPHcorners	getPHcorners
getStrainParamsFromFile	getStrainParamsFromFile
getStrainPHcorners	getStrainPHcorners
getValues	getValues
getVNPlotObject	getVNPlotObject
growthLimFunc	growthLimFuncDefault
growthLimFuncDefault	growthLimFuncDefault
LactateProducers	LactateProducers
makeInflowFromSoln	makeInflowFromSoln
makeNetworkMatrices	makeNetworkMatrices
makeParamMatrixG	makeParamMatrixG
makeParamMatrixS	makeParamMatrixS
massBalanceFunc	massBalanceFuncDefault
massBalanceFuncDefault	massBalanceFuncDefault
meanTraitFunc	meanTraitFunc
Methanogens	Methanogens
MFG	MFG
microbeSysInfo	microbeSysInfo
microbeSysInfoHuman	microbeSysInfoHuman
microbeSysInfoRumen	microbeSysInfoRumen
microPop	microPop-package
microPopModel	microPopModel
networkDFfromMPinput	networkDFfromMPinput
networkDFfromMPoutput	networkDFfromMPoutput
NoButyFibreDeg	NoButyFibreDeg
NoButyStarchDeg	NoButyStarchDeg
pHcentreOfMass	pHcentreOfMass
pHFunc	pHFuncDefault
pHFuncDefault	pHFuncDefault
pHLimFunc	pHLimFuncDefault
pHLimFuncDefault	pHLimFuncDefault
plotMicrobes	plotMicrobes
plotResources	plotResources
plotTraitChange	plotTraitChange
productionFunc	productionFuncDefault
productionFuncDefault	productionFuncDefault
PropionateProducers	PropionateProducers
quickPlot	quickPlot
quickPlot1	quickPlot1
quickPlot2	quickPlot2
rateFuncs	rateFuncsDefault
rateFuncsDefault	rateFuncsDefault
removalRateFunc	removalRateFuncDefault
removalRateFuncDefault	removalRateFuncDefault
replaceListItems	replaceListItems
reshapeFlowMat	reshapeFlowMat
resourceSysInfo	resourceSysInfo
resourceSysInfoHuman	resourceSysInfoHuman
resourceSysInfoRumen	resourceSysInfoRumen
runMicroPopExample	runMicroPopExample
strainParams	strainParams
subsetFunc	subsetFunc
sumConcOverStrains	sumConcOverStrains
sumFlowOverStrains	sumFlowOverStrains
sumFlowsOverPaths	sumFlowsOverPaths
systemInfoMicrobesPhyto	systemInfoMicrobesPhyto
systemInfoMicrobesVirus	systemInfoMicrobesVirus
systemInfoResourcesPhyto	systemInfoResourcesPhyto
systemInfoResourcesVirus	systemInfoResourcesVirus
uptakeFunc	uptakeFuncDefault
uptakeFuncDefault	uptakeFuncDefault
waterUptakeRatio	waterUptakeRatio
Xaa	Xaa
Xh2	Xh2
Xsu	Xsu
