R: Association Tests for Microbial Lineages on a Taxonomic Tree

# Association Tests for Microbial Lineages on a Taxonomic Tree

## Documentation for package ‘miLineage’ version 2.1

- DESCRIPTION file

## Help Pages

miLineage-package | Association Tests for Microbial Lineages on a Taxonomic Tree
data.real | Real data that include an OTU table, a taxonomy table, and a covariate table
data.toy | Simulated data that include an OTU table, a taxonomy table, and a covariate table
miLineage | Association Tests for Microbial Lineages on a Taxonomic Tree
QCAT | Quasi-Conditional Association Test (QCAT)
QCAT_GEE | QCAT+GEE Two-Part Test
ZIGDM | Zero-Inflated Generalized Dirichlet Multinomial (ZIGDM) Tests