Package: mbX
Type: Package
Title: A Comprehensive Microbiome Data Processing Pipeline
Version: 0.2.0
Depends: R (>= 4.1.0)
Authors@R: 
    person("Utsav", "Lamichhane",
           email = "utsav.lamichhane@gmail.com",
           role = c("aut", "cre"))
Description: 
    Provides tools for cleaning, processing, and preparing microbiome 
    sequencing data (e.g., 16S rRNA) for downstream analysis. Supports CSV, 
    TXT, and Excel file formats. The main function, ezclean(), automates 
    microbiome data transformation, including format validation, 
    transposition, numeric conversion, and metadata integration. It also 
    handles taxonomic levels efficiently, resolves duplicated taxa entries, 
    and outputs a well-structured, analysis-ready dataset. The companion 
    functions ezstat() run statistical tests and summarize results, while 
    ezviz() produces publication-ready visualizations.
License: MIT + file LICENSE
Encoding: UTF-8
Imports: tools, readxl, openxlsx, dplyr, tidyr, ggplot2, rstatix,
        tibble, FSA, multcompView
RoxygenNote: 7.3.2
VignetteBuilder: knitr
Suggests: knitr, rmarkdown
NeedsCompilation: no
Packaged: 2025-07-23 22:43:52 UTC; ugalab4
Maintainer: Utsav Lamichhane <utsav.lamichhane@gmail.com>
Author: Utsav Lamichhane [aut, cre]
Repository: CRAN
Date/Publication: 2025-07-23 23:00:02 UTC
Built: R 4.6.0; ; 2026-05-01 01:56:42 UTC; unix
