.onAttach               .onAttach function
BetaParameters          BetaParameters function
CovFunction             CovFunction function
CovFunction.function    CovFunction.function function
CovParameters           CovParameters function
CovarianceFct           CovarianceFct function
Cvb                     Cvb function
EvaluatePrior           EvaluatePrior function
Extract.mstppp          Extract.mstppp function
Extract.stppp           Extract.stppp function
GAfinalise              GAfinalise function
GAfinalise.MonteCarloAverage
                        GAfinalise.MonteCarloAverage function
GAfinalise.nullAverage
                        GAfinalise.nullAverage function
GAinitialise            GAinitialise function
GAinitialise.MonteCarloAverage
                        GAinitialise.MonteCarloAverage function
GAinitialise.nullAverage
                        GAinitialise.nullAverage function
GAreturnvalue           GAreturnvalue function
GAreturnvalue.MonteCarloAverage
                        GAreturnvalue.MonteCarloAverage function
GAreturnvalue.nullAverage
                        GAreturnvalue.nullAverage function##'
GAupdate                GAupdate function
GAupdate.MonteCarloAverage
                        GAupdate.MonteCarloAverage function
GAupdate.nullAverage    GAupdate.nullAverage function
GFfinalise              GFfinalise function
GFfinalise.dump2dir     GFfinalise.dump2dir function
GFfinalise.nullFunction
                        GFfinalise.nullFunction function
GFinitialise            GFinitialise function
GFinitialise.dump2dir   GFinitialise.dump2dir function
GFinitialise.nullFunction
                        GFinitialise.nullFunction function
GFreturnvalue           GFreturnvalue function
GFreturnvalue.dump2dir
                        GFreturnvalue.dump2dir function
GFreturnvalue.nullFunction
                        GFreturnvalue.nullFunction function
GFupdate                GFupdate function
GFupdate.dump2dir       GFupdate.dump2dir function
GFupdate.nullFunction   GFupdate.nullFunction function
GPdrv                   GPdrv function
GPdrv2                  GPdrv2 function
GPdrv2_Multitype        GPdrv2_Multitype function
GPlist2array            GPlist2array function
GPrealisation           GPrealisation function
GammafromY              GammafromY function
GaussianPrior           GaussianPrior function
KinhomAverage           KinhomAverage function
LogGaussianPrior        LogGaussianPrior function
MALAlgcp                MALAlgcp function
MALAlgcpAggregateSpatial.PlusPars
                        MALAlgcpAggregateSpatial.PlusPars function
MALAlgcpMultitypeSpatial.PlusPars
                        MALAlgcpMultitypeSpatial.PlusPars function
MALAlgcpSpatial         MALAlgcpSpatial function
MALAlgcpSpatial.PlusPars
                        MALAlgcpSpatial.PlusPars function
MALAlgcpSpatioTemporal.PlusPars
                        MALAlgcpSpatioTemporal.PlusPars function
MonteCarloAverage       MonteCarloAverage function
PriorSpec               PriorSpec function
PriorSpec.list          PriorSpec.list function
RandomFieldsCovFct      RandomFieldsCovFct function
SpatialPolygonsDataFrame.stapp
                        SpatialPolygonsDataFrame.stapp function
SpikedExponentialCovFct
                        SpikedExponentialCovFct function
YfromGamma              YfromGamma function
add.list                add.list function
addTemporalCovariates   addTemporalCovariates function
affine.SpatialPolygonsDataFrame
                        affine.SpatialPolygonsDataFrame function
affine.fromFunction     affine.fromFunction function
affine.fromSPDF         affine.fromSPDF function
affine.fromXYZ          affine.fromXYZ function
affine.stppp            affine.stppp function
aggCovInfo              aggCovInfo function
aggCovInfo.ArealWeightedMean
                        aggCovInfo.ArealWeightedMean function
aggCovInfo.ArealWeightedSum
                        aggCovInfo.ArealWeightedSum function
aggCovInfo.Majority     aggCovInfo.Majority function
aggregateCovariateInfo
                        aggregateCovariateInfo function
aggregateformulaList    aggregateformulaList function
andrieuthomsh           andrieuthomsh function
as.SpatialGridDataFrame
                        as.SpatialGridDataFrame function
as.SpatialGridDataFrame.fromXYZ
                        as.SpatialGridDataFrame.fromXYZ function
as.SpatialPixelsDataFrame
                        as.SpatialPixelsDataFrame function
as.SpatialPixelsDataFrame.lgcpgrid
                        as.SpatialPixelsDataFrame.lgcpgrid function
as.array.lgcpgrid       as.array.lgcpgrid function
as.fromXYZ              as.fromXYZ function
as.fromXYZ.fromFunction
                        as.fromXYZ.fromFunction function
as.im.fromFunction      as.im.fromFunction function
as.im.fromSPDF          as.im.fromSPDF function
as.im.fromXYZ           as.im.fromXYZ function
as.list.lgcpgrid        as.list.lgcpgrid function
as.owin.stapp           as.owin.stapp function
as.owinlist             as.owinlist function
as.owinlist.SpatialPolygonsDataFrame
                        as.owinlist.SpatialPolygonsDataFrame function
as.owinlist.stapp       as.owinlist.stapp function
as.ppp.mstppp           as.ppp.mstppp function
as.ppp.stppp            as.ppp.stppp function
as.stppp                as.stppp function
as.stppp.stapp          as.stppp.stapp function
assigninterp            assigninterp function
at                      at function
autocorr                autocorr function
autocorrMultitype       autocorrMultitype function
betavals                betavals function
blockcircbase           blockcircbase function
blockcircbaseFunction   blockcircbaseFunction function
bt.scalar               bt.scalar function
checkObsWin             checkObsWin function
chooseCellwidth         chooseCellwidth function
circulant               circulant function
circulant.matrix        circulant.matrix function
circulant.numeric       circulant.numeric function
clearinterp             clearinterp function
computeGradtruncSpatial
                        computeGradtruncSpatial function
computeGradtruncSpatioTemporal
                        computeGradtruncSpatioTemporal function
condProbs               condProbs function
constantInTime          constantInTime function
constantInTime.numeric
                        constantInTime.numeric function
constantInTime.stppp    constantInTime.stppp function
constanth               constanth function
cov.interp.fft          cov.interp.fft function
covEffects              covEffects function
d.func                  d.func function
density.stppp           density.stppp function
discreteWindow          discreteWindow function
discreteWindow.lgcpPredict
                        discreteWindow.lgcpPredict function
dump2dir                dump2dir function
eigenfrombase           eigenfrombase function
etavals                 etavals function
exceedProbs             exceedProbs function
exceedProbsAggregated   exceedProbsAggregated function
expectation             expectation function
expectation.lgcpPredict
                        expectation.lgcpPredict function
expectation.lgcpPredictSpatialOnlyPlusParameters
                        expectation.lgcpPredictSpatialOnlyPlusParameters
                        function
exponentialCovFct       exponentialCovFct function
extendspatialAtRisk     extendspatialAtRisk function
extract                 extract function
extract.lgcpPredict     extract.lgcpPredict function
fftgrid                 fftgrid function
fftinterpolate          fftinterpolate function
fftinterpolate.fromFunction
                        fftinterpolate.fromFunction function
fftinterpolate.fromSPDF
                        fftinterpolate.fromSPDF function
fftinterpolate.fromXYZ
                        interpolate.fromXYZ function
fftmultiply             fftmultiply function
formulaList             formulaList function
gDisjoint_wg            gDisjoint_wg function
gIntersects_pg          gIntersects_pg function
gOverlay                gOverlay function
gTouches_wg             gTouches_wg function
genFFTgrid              genFFTgrid function
getCellCounts           getCellCounts function
getCounts               getCounts function
getCovParameters        getCovParameters function
getCovParameters.GPrealisation
                        getCovParameters.GPrealisation function
getCovParameters.list   getCovParameters.list function
getLHSformulaList       getLHSformulaList function
getRotation             getRotation function
getRotation.default     getRotation.default function
getRotation.stppp       getRotation.stppp function
getZmat                 getZmat function
getZmats                getZmats function
getinterp               getinterp function
getlgcpPredictSpatialINLA
                        getlgcpPredictSpatialINLA function
getpolyol               getpolyol function
getup                   getup function
ginhomAverage           ginhomAverage function
grid2spdf               grid2spdf function
grid2spix               grid2spix function
grid2spoly              grid2spoly function
grid2spts               grid2spts function
gridInWindow            gridInWindow function
gridav                  gridav function
gridav.lgcpPredict      gridav.lgcpPredict function
gridfun                 gridfun function
gridfun.lgcpPredict     gridfun.lgcpPredict function
gu                      gu function
guessinterp             guessinterp function
hasNext                 generic hasNext method
hasNext.iter            hasNext.iter function
hvals                   hvals function
hvals.lgcpPredict       hvals.lgcpPredict function
identify.lgcpPredict    identify.lgcpPredict function
identifygrid            identifygrid function
image.lgcpgrid          image.lgcpgrid function
initialiseAMCMC         initialiseAMCMC function
initialiseAMCMC.andrieuthomsh
                        initaliseAMCMC.andrieuthomsh function
initialiseAMCMC.constanth
                        initaliseAMCMC.constanth function
integerise              integerise function
integerise.mstppp       integerise.mstppp function
integerise.stppp        integerise.stppp function
intens                  intens function
intens.lgcpPredict      intens.lgcpPredict function
intens.lgcpSimMultitypeSpatialPlusParameters
                        intens.lgcpSimMultitypeSpatialPlusParameters
                        function
intens.lgcpSimSpatialPlusParameters
                        intens.lgcpSimSpatialPlusParameters function
interptypes             interptypes function
inversebase             inversebase function
is.SPD                  is.SPD function
is.burnin               is this a burn-in iteration?
is.pow2                 is.pow2 function
is.retain               do we retain this iteration?
iteration               iteration number
lambdaEst               lambdaEst function
lambdaEst.ppp           lambdaEst.ppp function
lambdaEst.stppp         lambdaEst.stppp function
lgcpForecast            lgcpForecast function
lgcpInits               lgcpInits function
lgcpPredict             lgcpPredict function
lgcpPredictAggregateSpatialPlusPars
                        lgcpPredictAggregateSpatialPlusPars function
lgcpPredictAggregated   lgcpPredictAggregated function
lgcpPredictMultitypeSpatialPlusPars
                        lgcpPredictMultitypeSpatialPlusPars function
lgcpPredictSpatial      lgcpPredictSpatial function
lgcpPredictSpatialINLA
                        lgcpPredictSpatialINLA function
lgcpPredictSpatialPlusPars
                        lgcpPredictSpatialPlusPars function
lgcpPredictSpatioTemporalPlusPars
                        lgcpPredictSpatioTemporalPlusPars function
lgcpPrior               lgcpPrior function
lgcpSim                 lgcpSim function
lgcpSimMultitypeSpatialCovariates
                        lgcpSimMultitypeSpatialCovariates function
lgcpSimSpatial          lgcpSimSpatial function
lgcpSimSpatialCovariates
                        lgcpSimSpatialCovariates function
lgcpbayes               lgcpbayes function
lgcpgrid                lgcpgrid function
lgcpgrid.array          lgcpgrid.array function
lgcpgrid.list           lgcpgrid.list function
lgcpgrid.matrix         lgcpgrid.matrix function
lgcppars                lgcppars function
lgcpvignette            lgcpvignette function
loc2poly                loc2poly function
loop.mcmc               loop over an iterator
ltar                    ltar function
matchcovariance         matchcovariance function
maternCovFct15          maternCovFct15 function
maternCovFct25          maternCovFct25 function
mcmcLoop                iterator for MCMC loops
mcmcProgressNone        null progress monitor
mcmcProgressPrint       printing progress monitor
mcmcProgressTextBar     text bar progress monitor
mcmcProgressTk          graphical progress monitor
mcmcpars                mcmcpars function
mcmctrace               mcmctrace function
mcmctrace.lgcpPredict   mcmctrace.lgcpPredict function
meanfield               meanfield function
meanfield.lgcpPredict   meanfield.lgcpPredict function
meanfield.lgcpPredictINLA
                        meanfield.lgcpPredictINLA function
mstppp                  mstppp function
mstppp.list             mstppp.list function
mstppp.ppp              mstppp.ppp function
mstppp.stppp            mstppp.stppp function
muEst                   muEst function
multiply.list           multiply.list function
neattable               neattable function
neigh2D                 neigh2D function
nextStep                next step of an MCMC chain
nullAverage             nullAverage function
nullFunction            nullFunction function
numCases                numCases function
osppp2latlon            osppp2latlon function
osppp2merc              osppp2merc function
paramprec               paramprec function
paramprecbase           paramprecbase function
parautocorr             parautocorr function
parsummary              parsummary function
plot.fromSPDF           plot.fromSPDF function
plot.fromXYZ            plot.fromXYZ function
plot.lgcpAutocorr       plot.lgcpAutocorr function
plot.lgcpPredict        plot.lgcpPredict function
plot.lgcpQuantiles      plot.lgcpQuantiles function
plot.lgcpZmat           plot.lgcpZmat function
plot.lgcpgrid           plot.lgcpgrid function
plot.mcmcdiag           plot.mcmcdiag function
plot.mstppp             plot.mstppp function
plot.stppp              plot.stppp function
plot.temporalAtRisk     plot.temporalAtRisk function
plotExceed              plotExceed function
plotExceed.array        plotExceed.array function
plotExceed.lgcpPredict
                        plotExceed.lgcpPredict function
plotit                  plotit function
postcov                 postcov function
postcov.lgcpPredictAggregateSpatialPlusParameters
                        postcov.lgcpPredictAggregateSpatialPlusParameters
                        function
postcov.lgcpPredictMultitypeSpatialPlusParameters
                        postcov.lgcpPredictMultitypeSpatialPlusParameters
                        function
postcov.lgcpPredictSpatialOnlyPlusParameters
                        postcov.lgcpPredictSpatialOnlyPlusParameters
                        function
postcov.lgcpPredictSpatioTemporalPlusParameters
                        postcov.lgcpPredictSpatioTemporalPlusParameters
                        function
print.dump2dir          print.dump2dir function
print.fromFunction      print.fromFunction function
print.fromSPDF          print.fromSPDF function
print.fromXYZ           print.fromXYZ function
print.gridaverage       print.gridaverage function
print.lgcpPredict       print.lgcpPredict function
print.lgcpgrid          print.lgcpgrid function
print.mcmc              print.mcmc function
print.mstppp            print.mstppp function
print.stapp             print.stapp function
print.stppp             print.stppp function
print.temporalAtRisk    print.temporalAtRisk function
priorpost               priorpost function
quantile.lgcpPredict    quantile.lgcpPredict function
quantile.lgcpgrid       quantile.lgcpgrid function
raster.lgcpgrid         raster.lgcpgrid function
rescale.mstppp          rescale.mstppp function
rescale.stppp           rescale.stppp function
resetLoop               reset iterator
rgauss                  rgauss function
roteffgain              roteffgain function
rotmat                  rotmat function
rr                      rr function
rr.lgcpPredict          rr.lgcpPredict function
samplePosterior         samplePosterior function
segProbs                segProbs function
seintens                seintens function
seintens.lgcpPredict    seintens.lgcpPredict function
selectObsWindow         selectObsWindow function
selectObsWindow.default
                        selectObsWindow.default function
selectObsWindow.stppp   selectObsWindow.stppp function
serr                    serr function
serr.lgcpPredict        serr.lgcpPredict function
setTxtProgressBar2      set the progress bar
setoutput               setoutput function
showGrid                showGrid function
showGrid.default        showGrid.default function
showGrid.lgcpPredict    showGrid.lgcpPredict function
showGrid.stppp          showGrid.stppp function
smultiply.list          smultiply.list function
sparsebase              sparsebase function
spatialAtRisk           spatialAtRisk function
spatialAtRisk.SpatialGridDataFrame
                        spatialAtRisk.SpatialGridDataFrame function
spatialAtRisk.SpatialPolygonsDataFrame
                        spatialAtRisk.SpatialPolygonsDataFrame function
spatialAtRisk.bivden    spatialAtRisk.bivden function
spatialAtRisk.default   spatialAtRisk.default function
spatialAtRisk.fromXYZ   spatialAtRisk.fromXYZ function
spatialAtRisk.function
                        spatialAtRisk.function function
spatialAtRisk.im        spatialAtRisk.im function
spatialAtRisk.lgcpgrid
                        spatialAtRisk.lgcpgrid function
spatialIntensities      spatialIntensities function
spatialIntensities.fromSPDF
                        spatialIntensities.fromSPDF function
spatialIntensities.fromXYZ
                        spatialIntensities.fromXYZ function
spatialparsEst          spatialparsEst function
stGPrealisation         stGPrealisation function
stapp                   stapp function
stapp.SpatialPolygonsDataFrame
                        stapp.SpatialPolygonsDataFrame function
stapp.list              stapp.list function
stppp                   stppp function
stppp.list              stppp.list function
stppp.ppp               stppp.ppp function
summary.lgcpgrid        summary.lgcpgrid function
summary.mcmc            summary.mcmc function
target.and.grad.AggregateSpatialPlusPars
                        target.and.grad.AggregateSpatialPlusPars
                        function
target.and.grad.MultitypespatialPlusPars
                        target.and.grad.MultitypespatialPlusPars
                        function
target.and.grad.SpatioTemporalPlusPars
                        target.and.grad.SpatioTemporalPlusPars function
target.and.grad.spatial
                        target.and.grad.spatial function
target.and.grad.spatialPlusPars
                        target.and.grad.spatialPlusPars function
target.and.grad.spatiotemporal
                        target.and.grad.spatiotemporal function
tempRaster              tempRaster function
temporalAtRisk          temporalAtRisk function
temporalAtRisk.function
                        temporalAtRisk.function function
temporalAtRisk.numeric
                        temporalAtRisk.numeric function
textsummary             textsummary function
thetaEst                thetaEst function
toral.cov.mat           toral.cov.mat function
touchingowin            touchingowin function
traceplots              traceplots function
transblack              transblack function
transblue               transblue function
transgreen              transgreen function
transred                transred function
txtProgressBar2         A text progress bar with label
updateAMCMC             updateAMCMC function
updateAMCMC.andrieuthomsh
                        updateAMCMC.andrieuthomsh function
updateAMCMC.constanth   updateAMCMC.constanth function
varfield                varfield function
varfield.lgcpPredict    varfield.lgcpPredict function
varfield.lgcpPredictINLA
                        varfield.lgcpPredictINLA function
window.lgcpPredict      window.lgcpPredict function
wpopdata                Population of Welsh counties
wtowncoords             Welsh town details: location
wtowns                  Welsh town details: population
xvals                   xvals function
xvals.SpatialGridDataFrame
                        xvals.SpatialGridDataFrame function
xvals.default           xvals.default function
xvals.fromXYZ           xvals.fromXYZ function
xvals.lgcpPredict       xvals.lgcpPredict function
yvals                   yvals function
yvals.SpatialGridDataFrame
                        yvals.SpatialGridDataFrame function
yvals.default           yvals.default function
yvals.fromXYZ           yvals.fromXYZ function
yvals.lgcpPredict       yvals.lgcpPredict function
zvals                   zvals function
zvals.SpatialGridDataFrame
                        zvals.SpatialGridDataFrame function
zvals.default           zvals.default function
zvals.fromXYZ           zvals.fromXYZ function
