R: Pedigree Functions

# Pedigree Functions

## Documentation for package ‘kinship2’ version 1.9.6.2

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

align.pedigree | Generate plotting information for a pedigree
as.data.frame.pedigree | data.frame from a pedigree object
autohint | Align a pedigree to print well
bitSize | Calculate pedigree bitsize, defined as 2 * # NonFounders - # Founders
excludeStrayMarryin | Find or trim unavailable subjects in a pedigree
excludeUnavailFounders | Find or trim unavailable subjects in a pedigree
familycheck | Error check for a family classification
findAvailAffected | Find a single person to trim from a pedigree whose is available
findAvailNonInform | Find subjects from a pedigree who are available and uninformative
findUnavailable | Find or trim unavailable subjects in a pedigree
fixParents | Fix details on the parents for children of the pedigree
ibdMatrix | Create an IBD matrix
kindepth | Compute the depth of each subject in a pedigree
kinship | Compute a kinship matrix
kinship.default | Compute a kinship matrix
kinship.pedigree | Compute a kinship matrix
kinship.pedigreeList | Compute a kinship matrix
kinship2 | The kinship2 package for pedigree data
legendPlot | Legend Pedigree Plot
makefamid | Construct a family id from pedigree information
makekinship | Create a sparse kinship matrix
minnbreast | Minnesota Breast Cancer Study
minnbreast2 | Minnesota Breast Cancer Study
pedigree | Create a pedigree or pedigreeList object
pedigree.legend | plot a legend for a pedigree
pedigree.shrink | Shrink pedigree object
pedigree.trim | Find or trim unavailable subjects in a pedigree
pedigree.unrelated | Determine set of maximum number of unrelated available subjects from a pedigree
plot.pedigree | plot pedigrees
plot.pedigree.shrink | plot pedigree.shrink object that is a shrunk pedigree object
print.pedigree | Create a pedigree or pedigreeList object
print.pedigree.shrink | Shrink pedigree object
print.pedigreeList | Create a pedigree or pedigreeList object
sample.ped | Two example pedigrees
testped1 | testped1
[.pedigree | Create a pedigree or pedigreeList object
[.pedigreeList | Create a pedigree or pedigreeList object