Package: iSubGen
Title: Integrative Subtype Generation
Version: 1.0.5
Date: 2026-02-21
Authors@R: c(
	person("Mao Tian", role = "cre", email = "mtian@sbpdiscovery.org"),
	person("Paul Boutros", role = "aut"),
	person("Natalie Fox", role = "aut"),
	person("Dan Knight", role = "ctb"))
Description: Multi-data type subtyping, which is data type agnostic and accepts missing data. Subtyping is performed using intermediary assessments created with autoencoders and similarity calculations. See Fox et al. (2024) <doi:10.1016/j.crmeth.2024.100884> for details.
Depends: R (>= 3.2.3)
Imports: ConsensusClusterPlus, cluster (>= 1.14.4), keras, tensorflow,
        philentropy
Suggests: knitr, rmarkdown
Additional_repositories: https://bioc.r-universe.dev
VignetteBuilder: knitr
License: GPL-2
URL: https://github.com/uclahs-cds/package-iSubGen
BugReports: https://github.com/uclahs-cds/package-iSubGen/issues
NeedsCompilation: no
Packaged: 2026-02-23 19:38:47 UTC; mtian
Author: Mao Tian [cre],
  Paul Boutros [aut],
  Natalie Fox [aut],
  Dan Knight [ctb]
Maintainer: Mao Tian <mtian@sbpdiscovery.org>
Repository: CRAN
Date/Publication: 2026-02-24 10:00:19 UTC
Built: R 4.6.0; ; 2026-04-29 04:09:02 UTC; unix
