R: Integrative Subtype Generation

# Integrative Subtype Generation

## Documentation for package ‘iSubGen’ version 1.0.5

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

apply.scaling | Apply scaling factors
calculate.cis.matrix | Calculate consensus integrative correlation matrix
calculate.integrative.similarity.matrix | Calculate integrative similarity matrix
calculate.scaling | Calculate scaling factors
cluster.patients | Clustering to find patient subtypes
combine.integrative.features | Combine iSubGen integrative features
create.autoencoder | Create an autoencoder for dimensionality reduction
create.autoencoder.irf.matrix | Create matrix of independent reduced features
load.molecular.aberration.data | Load molecular aberration data
read.scaling.factors | Read scaling factors from file
write.scaling.factors | Write scaling factors to file