# Generated by roxygen2: do not edit by hand

export(create_package_manifest)
export(ifcb_adjust_classes)
export(ifcb_annotate_batch)
export(ifcb_annotate_samples)
export(ifcb_classify_images)
export(ifcb_classify_models)
export(ifcb_classify_sample)
export(ifcb_convert_filenames)
export(ifcb_correct_annotation)
export(ifcb_count_mat_annotations)
export(ifcb_create_class2use)
export(ifcb_create_empty_manual_file)
export(ifcb_create_manifest)
export(ifcb_create_manual_file)
export(ifcb_download_dashboard_data)
export(ifcb_download_dashboard_metadata)
export(ifcb_download_test_data)
export(ifcb_download_whoi_plankton)
export(ifcb_extract_annotated_images)
export(ifcb_extract_biovolumes)
export(ifcb_extract_classified_images)
export(ifcb_extract_features)
export(ifcb_extract_pngs)
export(ifcb_get_ecotaxa_example)
export(ifcb_get_ferrybox_data)
export(ifcb_get_mat_names)
export(ifcb_get_mat_variable)
export(ifcb_get_runtime)
export(ifcb_get_shark_colnames)
export(ifcb_get_shark_example)
export(ifcb_get_trophic_type)
export(ifcb_is_diatom)
export(ifcb_is_in_basin)
export(ifcb_is_near_land)
export(ifcb_list_dashboard_bins)
export(ifcb_match_taxa_names)
export(ifcb_merge_manual)
export(ifcb_prepare_whoi_plankton)
export(ifcb_psd)
export(ifcb_psd_plot)
export(ifcb_py_install)
export(ifcb_read_features)
export(ifcb_read_hdr_data)
export(ifcb_read_mat)
export(ifcb_read_summary)
export(ifcb_replace_mat_values)
export(ifcb_run_image_gallery)
export(ifcb_save_classification)
export(ifcb_summarize_biovolumes)
export(ifcb_summarize_class_counts)
export(ifcb_summarize_png_counts)
export(ifcb_summarize_png_metadata)
export(ifcb_volume_analyzed)
export(ifcb_volume_analyzed_from_adc)
export(ifcb_which_basin)
export(ifcb_zip_images_by_class)
export(ifcb_zip_matlab)
export(ifcb_zip_pngs)
export(process_ifcb_string)
export(read_hdr_file)
export(retrieve_worms_records)
export(split_large_zip)
export(summarize_TBclass)
export(vol2C_lgdiatom)
export(vol2C_nondiatom)
import(shiny)
importFrom(R.matlab,readMat)
importFrom(cli,cli_abort)
importFrom(cli,cli_alert_info)
importFrom(cli,cli_alert_success)
importFrom(cli,cli_alert_warning)
importFrom(cli,cli_inform)
importFrom(cli,cli_progress_bar)
importFrom(cli,cli_progress_done)
importFrom(cli,cli_progress_update)
importFrom(cli,cli_warn)
importFrom(cli,qty)
importFrom(curl,curl_download)
importFrom(curl,curl_fetch_memory)
importFrom(curl,handle_setheaders)
importFrom(curl,handle_setopt)
importFrom(curl,multi_download)
importFrom(curl,new_handle)
importFrom(dplyr,"%>%")
importFrom(dplyr,across)
importFrom(dplyr,all_of)
importFrom(dplyr,arrange)
importFrom(dplyr,as_tibble)
importFrom(dplyr,bind_rows)
importFrom(dplyr,case_when)
importFrom(dplyr,coalesce)
importFrom(dplyr,contains)
importFrom(dplyr,count)
importFrom(dplyr,cur_column)
importFrom(dplyr,desc)
importFrom(dplyr,everything)
importFrom(dplyr,filter)
importFrom(dplyr,first)
importFrom(dplyr,full_join)
importFrom(dplyr,group_by)
importFrom(dplyr,if_any)
importFrom(dplyr,left_join)
importFrom(dplyr,mutate)
importFrom(dplyr,n)
importFrom(dplyr,n_distinct)
importFrom(dplyr,pull)
importFrom(dplyr,relocate)
importFrom(dplyr,rename)
importFrom(dplyr,rename_with)
importFrom(dplyr,row_number)
importFrom(dplyr,rowwise)
importFrom(dplyr,select)
importFrom(dplyr,slice_min)
importFrom(dplyr,summarise)
importFrom(dplyr,summarize)
importFrom(dplyr,tibble)
importFrom(dplyr,ungroup)
importFrom(ggplot2,aes)
importFrom(ggplot2,annotate)
importFrom(ggplot2,coord_cartesian)
importFrom(ggplot2,coord_sf)
importFrom(ggplot2,element_blank)
importFrom(ggplot2,element_rect)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_sf)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,ggsave)
importFrom(ggplot2,labs)
importFrom(ggplot2,margin)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,stat_function)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_minimal)
importFrom(ggplot2,xlim)
importFrom(ggplot2,ylim)
importFrom(lifecycle,deprecate_stop)
importFrom(lifecycle,deprecate_warn)
importFrom(lifecycle,deprecated)
importFrom(lifecycle,is_present)
importFrom(lubridate,as_datetime)
importFrom(lubridate,ceiling_date)
importFrom(lubridate,date)
importFrom(lubridate,day)
importFrom(lubridate,days)
importFrom(lubridate,floor_date)
importFrom(lubridate,hours)
importFrom(lubridate,minutes)
importFrom(lubridate,month)
importFrom(lubridate,round_date)
importFrom(lubridate,seconds)
importFrom(lubridate,with_tz)
importFrom(lubridate,year)
importFrom(lubridate,ymd)
importFrom(lubridate,ymd_hms)
importFrom(png,writePNG)
importFrom(readr,col_character)
importFrom(readr,cols)
importFrom(readr,read_csv)
importFrom(readr,read_delim)
importFrom(readr,read_tsv)
importFrom(readr,type_convert)
importFrom(reticulate,import)
importFrom(reticulate,py_available)
importFrom(reticulate,py_config)
importFrom(reticulate,py_discover_config)
importFrom(reticulate,py_install)
importFrom(reticulate,py_list_packages)
importFrom(reticulate,py_module_available)
importFrom(reticulate,py_require)
importFrom(reticulate,py_run_string)
importFrom(reticulate,source_python)
importFrom(reticulate,use_python)
importFrom(reticulate,use_virtualenv)
importFrom(reticulate,virtualenv_create)
importFrom(reticulate,virtualenv_exists)
importFrom(reticulate,virtualenv_list)
importFrom(reticulate,virtualenv_root)
importFrom(sf,st_area)
importFrom(sf,st_as_sf)
importFrom(sf,st_as_sfc)
importFrom(sf,st_bbox)
importFrom(sf,st_buffer)
importFrom(sf,st_crs)
importFrom(sf,st_geometry_type)
importFrom(sf,st_intersection)
importFrom(sf,st_intersects)
importFrom(sf,st_make_valid)
importFrom(sf,st_read)
importFrom(sf,st_transform)
importFrom(sf,st_union)
importFrom(sf,st_within)
importFrom(sf,st_wrap_dateline)
importFrom(sf,st_write)
importFrom(stats,aggregate)
importFrom(stats,median)
importFrom(stats,na.omit)
importFrom(stats,setNames)
importFrom(stringr,str_extract)
importFrom(stringr,str_match)
importFrom(stringr,str_remove)
importFrom(stringr,str_remove_all)
importFrom(stringr,str_replace)
importFrom(stringr,str_replace_all)
importFrom(stringr,str_wrap)
importFrom(stringr,word)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,pivot_wider)
importFrom(tools,file_path_sans_ext)
importFrom(utils,modifyList)
importFrom(utils,read.csv)
importFrom(utils,read.table)
importFrom(utils,write.table)
importFrom(worrms,wm_records_names)
importFrom(zip,unzip)
importFrom(zip,zip)
importFrom(zip,zipr)
