P_sojae_survey          _Phytophthora sojae_ Survey Example Data
autoplot.hagis.complexities
                        Plot hagis Complexities Objects
autoplot.hagis.gene.summary
                        Plot hagis Summary Objects
calculate_complexities
                        Calculate Distribution of Complexities by
                        Sample
calculate_diversities   Calculate Diversities Indices
create_binary_matrix    Create Binary Data Matrix From Pathotype Data
diversities_table       Custom Print for hagis Diversities Tables
individual_pathotypes   Prints Individual Pathotypes for Each Sample
sample_meta             _Phytophthora sojae_ Survey Example Metadata
summarize_gene          Calculate and Summarize Distribution of
                        Susceptibilities by Gene
