# Generated by roxygen2: do not edit by hand

S3method(add_clusters,gggenomes)
S3method(add_clusters,gggenomes_layout)
S3method(add_feats,gggenomes)
S3method(add_feats,gggenomes_layout)
S3method(add_links,gggenomes)
S3method(add_links,gggenomes_layout)
S3method(add_seqs,gggenomes)
S3method(add_seqs,gggenomes_layout)
S3method(add_subfeats,gggenomes)
S3method(add_subfeats,gggenomes_layout)
S3method(add_sublinks,gggenomes)
S3method(add_sublinks,gggenomes_layout)
S3method(as_bounds,default)
S3method(as_bounds,numeric)
S3method(as_feats,default)
S3method(as_feats,tbl_df)
S3method(as_links,default)
S3method(as_links,tbl_df)
S3method(as_seqs,default)
S3method(as_seqs,tbl_df)
S3method(as_subfeats,default)
S3method(as_subfeats,tbl_df)
S3method(as_sublinks,default)
S3method(as_sublinks,tbl_df)
S3method(as_tibble,GRanges)
S3method(check_strand,character)
S3method(check_strand,factor)
S3method(check_strand,logical)
S3method(check_strand,numeric)
S3method(dim,gggenomes_layout)
S3method(flip,gggenomes)
S3method(flip,gggenomes_layout)
S3method(flip_seqs,gggenomes)
S3method(flip_seqs,gggenomes_layout)
S3method(flip_strand,character)
S3method(flip_strand,logical)
S3method(flip_strand,numeric)
S3method(get_seqs,gggenomes)
S3method(get_seqs,gggenomes_layout)
S3method(layout,gggenomes)
S3method(layout,gggenomes_layout)
S3method(makeContent,genetree)
S3method(print,gggenomes_layout)
S3method(pull_bins,gggenomes)
S3method(pull_bins,gggenomes_layout)
S3method(pull_feats,gggenomes)
S3method(pull_feats,gggenomes_layout)
S3method(pull_genes,gggenomes)
S3method(pull_genes,gggenomes_layout)
S3method(pull_links,gggenomes)
S3method(pull_links,gggenomes_layout)
S3method(pull_seqs,gggenomes)
S3method(pull_seqs,gggenomes_layout)
S3method(pull_track,gggenomes)
S3method(pull_track,gggenomes_layout)
S3method(set_seqs,gggenomes)
S3method(set_seqs,gggenomes_layout)
S3method(strand_chr,character)
S3method(strand_chr,factor)
S3method(strand_chr,logical)
S3method(strand_chr,numeric)
S3method(strand_int,character)
S3method(strand_int,factor)
S3method(strand_int,logical)
S3method(strand_int,numeric)
S3method(strand_lgl,character)
S3method(strand_lgl,logical)
S3method(strand_lgl,numeric)
S3method(sync,gggenomes)
S3method(sync,gggenomes_layout)
S3method(track_ids,gggenomes)
S3method(track_ids,gggenomes_layout)
S3method(track_info,gggenomes)
S3method(track_info,gggenomes_layout)
S3method(tracks,gggenomes)
S3method(tracks,gggenomes_layout)
export("%<>%")
export("%>%")
export(GeomFeatText)
export(PositionPile)
export(PositionSixframe)
export(PositionStrand)
export(PositionStrandpile)
export(add_class)
export(add_clusters)
export(add_feats)
export(add_links)
export(add_seqs)
export(add_subfeats)
export(add_sublinks)
export(align)
export(as_feats)
export(as_links)
export(as_seqs)
export(as_subfeats)
export(as_sublinks)
export(bins)
export(check_strand)
export(combine_strands)
export(def_formats)
export(def_names)
export(def_types)
export(drop_feat_layout)
export(drop_layout)
export(drop_link_layout)
export(drop_seq_layout)
export(ex)
export(feats)
export(feats0)
export(flip)
export(flip_seqs)
export(flip_strand)
export(focus)
export(genes)
export(geom_bin_label)
export(geom_coverage)
export(geom_feat)
export(geom_feat_label)
export(geom_feat_note)
export(geom_feat_tag)
export(geom_feat_text)
export(geom_gene)
export(geom_gene_label)
export(geom_gene_note)
export(geom_gene_tag)
export(geom_gene_text)
export(geom_link)
export(geom_link_curved)
export(geom_link_label)
export(geom_link_line)
export(geom_seq)
export(geom_seq_break)
export(geom_seq_label)
export(geom_variant)
export(geom_wiggle)
export(get_seqs)
export(gggenomes)
export(has_vars)
export(if_reverse)
export(in_range)
export(introduce)
export(is_reverse)
export(label_bp)
export(layout)
export(layout_genomes)
export(layout_seqs)
export(links)
export(locate)
export(pick)
export(pick_by_tree)
export(pick_seqs)
export(pick_seqs_within)
export(position_pile)
export(position_sixframe)
export(position_strand)
export(position_strandpile)
export(position_variant)
export(pull_bins)
export(pull_feats)
export(pull_genes)
export(pull_links)
export(pull_seqs)
export(pull_track)
export(qc)
export(qw)
export(read_alitv)
export(read_bed)
export(read_blast)
export(read_context)
export(read_fai)
export(read_feats)
export(read_gbk)
export(read_gff3)
export(read_links)
export(read_paf)
export(read_seq_len)
export(read_seqs)
export(read_subfeats)
export(read_sublinks)
export(read_vcf)
export(require_vars)
export(scale_color_variant)
export(scale_shape_variant)
export(scale_x_bp)
export(seqs)
export(set_class)
export(set_seqs)
export(shift)
export(split_by)
export(strand_chr)
export(strand_int)
export(strand_lgl)
export(strip_class)
export(swap_if)
export(swap_query)
export(sync)
export(theme_gggenomes_clean)
export(track)
export(track_ids)
export(track_info)
export(unnest_exons)
export(vars_track)
export(width)
export(width0)
export(write_gff3)
import(dplyr)
import(ggplot2)
import(grid)
import(rlang)
import(stringr)
import(tidyr)
importFrom(ggplot2,geom_segment)
importFrom(ggplot2,geom_text)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_bw)
importFrom(jsonlite,fromJSON)
importFrom(magrittr,"%<>%")
importFrom(magrittr,"%>%")
importFrom(methods,is)
importFrom(readr,read_tsv)
importFrom(rlang,.data)
importFrom(stats,na.omit)
importFrom(tidyr,unnest)
importFrom(tidyr,unnest_wider)
importFrom(utils,type.convert)
