Package: genio
Title: Genetics Input/Output Functions
Version: 1.1.2
Authors@R: 
    person(given = "Alejandro",
	   family = "Ochoa",
	   role = c("aut", "cre"),
	   email = "alejandro.ochoa@duke.edu",
           comment = c(ORCID = "0000-0003-4928-3403"))
Description: Implements readers and writers for file formats associated with genetics data.  Reading and writing Plink BED/BIM/FAM and GCTA binary GRM formats is fully supported, including a lightning-fast BED reader and writer implementations.  Other functions are 'readr' wrappers that are more constrained, user-friendly, and efficient for these particular applications; handles Plink and Eigenstrat tables (FAM, BIM, IND, and SNP files).  There are also make functions for FAM and BIM tables with default values to go with simulated genotype data.
License: GPL-3
Encoding: UTF-8
RoxygenNote: 7.2.3
Imports: readr (>= 2.0.0), tibble, dplyr, Rcpp
LinkingTo: Rcpp
Suggests: testthat, knitr, rmarkdown, BEDMatrix, snpStats, lobstr
VignetteBuilder: knitr
URL: https://github.com/OchoaLab/genio
BugReports: https://github.com/OchoaLab/genio/issues
NeedsCompilation: yes
Packaged: 2023-01-06 16:24:30 UTC; viiia
Author: Alejandro Ochoa [aut, cre] (<https://orcid.org/0000-0003-4928-3403>)
Maintainer: Alejandro Ochoa <alejandro.ochoa@duke.edu>
Repository: CRAN
Date/Publication: 2023-01-06 23:00:05 UTC
Built: R 4.6.0; x86_64-apple-darwin20; 2026-04-29 18:17:00 UTC; unix
Archs: genio.so.dSYM
