Package: do3PCA
Title: Probabilistic Phylogenetic Principal Component Analysis
Version: 1.0.0
Authors@R: 
    person("Daniel", "Caetano", , "caetanods1@gmail.com", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0002-2803-4064"))
Description: Estimates probabilistic phylogenetic Principal Component Analysis (PCA) and non-phylogenetic probabilistic PCA. Provides methods to implement alternative models of trait evolution including Brownian motion (BM), Ornstein-Uhlenbeck (OU), Early Burst (EB), and Pagel's lambda. Also provides flexible biplot functions.
License: GPL (>= 2.0)
Encoding: UTF-8
Depends: R (>= 3.5.0), Rdimtools
Imports: ape, phytools, matrixcalc, mclust, nloptr, ratematrix, stats,
        utils
RoxygenNote: 7.3.1
NeedsCompilation: no
Packaged: 2024-09-23 15:42:47 UTC; daniel
Author: Daniel Caetano [aut, cre] (<https://orcid.org/0000-0002-2803-4064>)
Maintainer: Daniel Caetano <caetanods1@gmail.com>
Repository: CRAN
Date/Publication: 2024-09-24 19:10:10 UTC
Built: R 4.6.0; ; 2026-04-30 10:17:23 UTC; unix
