.bh_threshold	dot-bh_threshold
.check_has_cols	dot-check_has_cols
.get_strata_df	dot-get_strata_df
.jaccard	dot-jaccard
.make_stratum_id	dot-make_stratum_id
.safe_df	dot-safe_df
add_pseudo_pvalues_to_list	add_pseudo_pvalues_to_list
as_dfdr_tbl	as_dfdr_tbl
choose_low_conf	choose_low_conf
compete_max_score	compete_max_score
dfdr_bh_diagnostics	dfdr_bh_diagnostics
dfdr_bh_elasticity	dfdr_bh_elasticity
dfdr_curve_stability	dfdr_curve_stability
dfdr_elasticity	dfdr_elasticity
dfdr_equal_chance_qbands	dfdr_equal_chance_qbands
dfdr_headline	dfdr_headline
dfdr_local_tail	dfdr_local_tail
dfdr_pep_decoy_sanity	dfdr_pep_decoy_sanity
dfdr_pep_reliability	dfdr_pep_reliability
dfdr_pep_reliability_tdc	dfdr_pep_reliability_tdc
dfdr_pi0_storey	dfdr_pi0_storey
dfdr_plot_bh_elasticity	dfdr_plot_bh_elasticity
dfdr_plot_cv	dfdr_plot_cv
dfdr_plot_dalpha	dfdr_plot_dalpha
dfdr_plot_dwin	dfdr_plot_dwin
dfdr_plot_elasticity	dfdr_plot_elasticity
dfdr_plot_equal_chance	dfdr_plot_equal_chance
dfdr_plot_fdrhat_pi0	dfdr_plot_fdrhat_pi0
dfdr_plot_pep_density_by_decoy	dfdr_plot_pep_density_by_decoy
dfdr_plot_pep_reliability	dfdr_plot_pep_reliability
dfdr_plot_pep_reliability_tdc	dfdr_plot_pep_reliability_tdc
dfdr_plot_pi0	dfdr_plot_pi0
dfdr_plot_p_calibration	dfdr_plot_p_calibration
dfdr_plot_p_calibration2	dfdr_plot_p_calibration2
dfdr_plot_p_density_by_decoy	dfdr_plot_p_density_by_decoy
dfdr_plot_scope_disagreement_matrix	dfdr_plot_scope_disagreement_matrix
dfdr_plot_score_distributions	dfdr_plot_score_distributions
dfdr_p_calibration	dfdr_p_calibration
dfdr_render_report	dfdr_render_report
dfdr_run_all	dfdr_run_all
dfdr_run_jaccard	dfdr_run_jaccard
dfdr_safe_filename	dfdr_safe_filename
dfdr_scope_disagreement	dfdr_scope_disagreement
dfdr_summary_headline	dfdr_summary_headline
dfdr_sumpep	dfdr_sumpep
dfdr_write_manifest	dfdr_write_manifest
dfdr_write_readme	dfdr_write_readme
dfdr_write_report	dfdr_write_report
diann_detect_run_col	diann_detect_run_col
diann_global_minrunq	diann_global_minrunq
diann_global_precursor	diann_global_precursor
diann_require_cols	diann_require_cols
diann_runxprecursor	diann_runxprecursor
flag_headline	flag_headline
jaccard_vec	jaccard_vec
mokapot_competed_universe	mokapot_competed_universe
mokapot_is_target_to_logical	mokapot_is_target_to_logical
mzid_parse_psms	mzid_parse_psms
mzid_score_direction	mzid_score_direction
mzid_to_internal_score	mzid_to_internal_score
print.dfdr_tbl	print.dfdr_tbl
read_dfdr_maxquant_msms	read_dfdr_maxquant_msms
read_dfdr_mzid	read_dfdr_mzid
read_diann_parquet	read_diann_parquet
read_mokapot_psms	read_mokapot_psms
read_spectronaut	read_spectronaut
read_spectronaut_efficient	read_spectronaut_efficient
safe_max	safe_max
safe_mean	safe_mean
safe_min	safe_min
score_to_pvalue	score_to_pvalue
spectronaut_detect_run_col	spectronaut_detect_run_col
spectronaut_parse_decoy	spectronaut_parse_decoy
spectronaut_recompute_q_from_score	spectronaut_recompute_q_from_score
spectronaut_require_cols	spectronaut_require_cols
spectronaut_runxprecursor	spectronaut_runxprecursor
tdc_qvalues	tdc_qvalues
validate_dfdr_tbl	validate_dfdr_tbl
wilson_ci	wilson_ci
