Package: detectRUNS
Type: Package
Title: Detect Runs of Homozygosity and Runs of Heterozygosity in
        Diploid Genomes
Version: 0.9.6
Date: 2019-10-24
Authors@R: c(
    person("Filippo","Biscarini", email="filippo.biscarini@gmail.com", role=c("aut", "cre")),
    person("Paolo","Cozzi", email="paolo.cozzi@ptp.it", role="aut"),
    person("Giustino","Gaspa", email="gigaspa@uniss.it", role="aut"),
    person("Gabriele","Marras", email="gmarras@uoguelph.ca", role="aut")
  )
Description: Detection of runs of homozygosity and of heterozygosity
    in diploid genomes using two methods: sliding windows (Purcell et al (2007)
    <doi:10.1086/519795>) and consecutive runs (Marras et al (2015)
    <doi:10.1111/age.12259>).
Depends: R (>= 3.0.0)
License: GPL-3
LazyData: TRUE
Encoding: UTF-8
Imports: plyr, iterators, itertools, ggplot2, reshape2, Rcpp,
        gridExtra, data.table
RoxygenNote: 6.1.1
Suggests: testthat, knitr, rmarkdown, prettydoc
LinkingTo: Rcpp
VignetteBuilder: knitr
URL:
        https://github.com/bioinformatics-ptp/detectRUNS/tree/master/detectRUNS
BugReports: https://github.com/bioinformatics-ptp/detectRUNS/issues
NeedsCompilation: yes
Packaged: 2019-10-24 13:23:54 UTC; filippo
Author: Filippo Biscarini [aut, cre],
  Paolo Cozzi [aut],
  Giustino Gaspa [aut],
  Gabriele Marras [aut]
Maintainer: Filippo Biscarini <filippo.biscarini@gmail.com>
Repository: CRAN
Date/Publication: 2019-10-24 13:40:02 UTC
Built: R 4.6.0; x86_64-apple-darwin20; 2026-04-28 02:01:48 UTC; unix
Archs: detectRUNS.so.dSYM
