R: Programmatic Analysis of Sediment Cores Using Computed Tomography Imaging

# Programmatic Analysis of Sediment Cores Using Computed Tomography Imaging

## Documentation for package ‘coreCT’ version 1.3.3

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

conv | Convert a matrix of semi-processed DICOM images to mass and volume of material classes. This is a deprecated version.
convDir | Convert a directory of raw DICOM images to material classes
convert | Convert a matrix of semi-processed DICOM images to mass and volume of material classes
convertDir | Convert a directory of raw DICOM images to material classes
coreHist | Whole-core frequency distribution of Hounsfield units
core_426 | Three computed tomography scans from a Spartina alterniflora core
getRoots | Convert a matrix of semi-processed DICOM images to root particle counts, volumes, and surface areas
getRootsDir | Convert a directory of raw DICOM images to root particle counts and surface areas
getSurface | Remove artificial surface layers from processed CT data
rootSize | Convert a matrix of semi-processed DICOM images to root particle counts, volumes, and surface areas
rootSizeDir | Convert a directory of raw DICOM images to root particle counts and surface areas
voxDims | Extract voxel dimensions from DICOM image