Package: copyseparator
Type: Package
Title: Assembling Long Gene Copies from Short Read Data
Version: 1.2.0
Author: Lei Yang
Maintainer: Lei Yang <leiyangslu@gmail.com>
Description: Assembles two or more gene copies from short-read Next-Generation Sequencing data. Works best when there are only two gene copies and read length >=250 base pairs. High and relatively even coverage are important.
License: GPL-2
URL: https://github.com/LeiYang-Fish/copyseparator
BugReports: https://github.com/LeiYang-Fish/copyseparator/issues
Depends: R (>= 3.5.0)
Encoding: UTF-8
Imports: ape, seqinr, stringr, kmer, DECIPHER, beepr, Biostrings,
        grDevices, doParallel, foreach, parallel
RoxygenNote: 7.2.1
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2022-11-25 00:14:04 UTC; lyang1
Repository: CRAN
Date/Publication: 2022-11-25 00:30:02 UTC
Built: R 4.6.0; ; 2026-04-28 01:27:45 UTC; unix
