Package: colocPropTest
Title: Proportional Testing for Colocalisation Analysis
Version: 0.9.3
Authors@R: 
    person("Chris", "Wallace", email="cew54@cam.ac.uk", role = c("aut", "cre"),
           comment = c(ORCID = "0000-0001-9755-1703"))
Description: Colocalisation analysis tests whether two traits share a causal
  genetic variant in a specified genomic region. Proportional testing for
  colocalisation has been previously proposed
  [Wallace (2013) <doi:10.1002/gepi.21765>], but is reimplemented here to
  overcome barriers to its adoption. Its use is complementary to the fine-
  mapping based colocalisation method in the 'coloc' package, and may be used in
  particular to identify false "H3" conclusions in 'coloc'.
License: GPL (>= 3)
Encoding: UTF-8
RoxygenNote: 7.3.2
VignetteBuilder: knitr
Depends: magrittr, data.table
Imports: car, coloc, graphics, stats, utils
Suggests: knitr, plotrix, testthat (>= 3.0.0)
Config/testthat/edition: 3
NeedsCompilation: no
Packaged: 2025-09-16 10:49:28 UTC; chrisw
Author: Chris Wallace [aut, cre] (ORCID:
    <https://orcid.org/0000-0001-9755-1703>)
Maintainer: Chris Wallace <cew54@cam.ac.uk>
Repository: CRAN
Date/Publication: 2025-09-16 11:00:12 UTC
Built: R 4.6.0; ; 2026-05-01 01:22:11 UTC; unix
