c212-package            Methods for the Detection of Safety Signals in
                        Randomised Controlled Trials using Groupings.
c212.1a                 Implementation of the Berry and Berry
                        Three-Level Hierarchical Model without
                        Point-Mass.
c212.1a.interim         A Two or Three-Level Hierarchical Body-system
                        based Model for interim analysis without
                        Point-Mass.
c212.BB                 Implementation of the Berry and Berry
                        Three-Level Hierarchical Model.
c212.BB.interim         A Two or Three-Level Hierarchical Body-system
                        based Model for interim analysis with
                        Point-Mass.
c212.BH                 Implementation of Benjamini-Hochberg procedure
                        for False Discovery Rate control
c212.BH.adjust.pvals    Benjamini-Hochberg procedure adjusted p-values
c212.BONF               Implementation of Bonferroni correction for
                        error control
c212.DFDR               Implementation of the Double False Discovery
                        Rate for controlling the False Discovery Rate.
c212.FDR.data           Fisher Test p-values for End of Trial Data
                        Clinical Data
c212.GBH                Implementaion of Group Bonferroni-Hochberg
                        procedure for control of the False Discovery
                        Rate
c212.LSL                Implementaion of the least-slope estimator
                        estimator (LSL) for the proportion of true null
                        hypotheses.
c212.NOADJ              Unadjusted test of multiple hypotheses.
c212.TST                Implementaion of the two-stage estimator (TST)
                        for the proportion of true null hypotheses.
c212.bin.test           Plot Raw Adverse Event Incidence Data
c212.convergence.diag   Convergence Diagnostics of the Simulation
c212.err.cntrl          Implementaion of Group Bonferroni-Hochberg
                        procedure for control of the False Discovery
                        Rate
c212.fisher.test        Fisher Exact Test
c212.gen.initial.values
                        Generate a template simulation initial values.
c212.global.sim.params
                        Generate a template for the individual model
                        parameter simulation control parameters.
c212.hyper.params       Generate a template for the individual model
                        parameter simulation control parameters.
c212.interim.1a.hier2   A Two-Level Hierarchical Body-system based
                        Model for interim analysis without Point-Mass.
c212.interim.1a.hier3   A Three-Level Hierarchical Body-system based
                        Model for interim analysis without Point-Mass.
c212.interim.BB.hier2   A Three-Level Hierarchical Body-system based
                        Model for interim analysis with Point-Mass.
c212.interim.BB.hier3   A Three-Level Hierarchical Body-system based
                        Model for interim analysis with Point-Mass.
c212.interim.MLE        Poisson Maximum Likelihood Estimator
c212.monitor.samples    Generate a template for choosing which samples
                        to monitor.
c212.plot.eot.data      Plot Adverse Event Incidence Data
c212.plot.interim.data
                        Plot Adverse Event Count Data for a Body-system
                        by Interval
c212.plot.samples       Plot Posterior Distribution
c212.pointmass.weights
                        Generate a template for the point-mass
                        weightings.
c212.print.convergence.summary
                        Print a Summary of the Convergence Diagnostics
                        of the Simulation
c212.print.summary.stats
                        Print the Summary Statistics of Posterior
                        Distributions
c212.ptheta             Reports the posterior probability that theta
                        (the increase in the log-odds) is greater than
                        zero for each Adverse Event
c212.sim.control.params
                        Generate a template for the individual model
                        parameter simulation control parameters.
c212.ssBH               Implementation of Subset Benjamini-Hochberg for
                        False Discover Rate control
c212.summary.stats      Summary Statistics for the Posterior
                        Distributions in the model.
c212.trial.data         End of Trial Data Clinical Data for Adverse
                        Event Incidence
c212.trial.interval.data1
                        Interim analysis trial data.
c212.trial.interval.data2
                        Interim analysis trial data.
