R: Statistical Tools for Filebacked Big Matrices

# Statistical Tools for Filebacked Big Matrices

## Documentation for package ‘bigstatsr’ version 1.6.2

- DESCRIPTION file
- Package NEWS
- Package README

## Help Pages

%*%-method | Product with a matrix
add_code256 | Class FBM.code256
asPlotlyText | Plotly text
as_FBM | Class FBM
as_scaling_fun | Scaling function creator
AUC | AUC
AUCBoot | AUC
big_apply | Split-Apply-Combine
big_colstats | Standard univariate statistics
big_copy | Copy as a Filebacked Big Matrix
big_cor | Correlation
big_counts | Counts for class FBM.code256
big_cprodMat | Cross-product with a matrix
big_cprodVec | Cross-product with a vector
big_crossprodSelf | Crossprod
big_increment | Increment an FBM
big_parallelize | Split-parApply-Combine
big_prodMat | Product with a matrix
big_prodVec | Product with a vector
big_randomSVD | Randomized partial SVD
big_read | Read a file as FBM
big_scale | Some scaling functions
big_spLinReg | Sparse linear regression
big_spLogReg | Sparse logistic regression
big_SVD | Partial SVD
big_tcrossprodSelf | Tcrossprod
big_transpose | Transpose an FBM
big_univLinReg | Column-wise linear regression
big_univLogReg | Column-wise logistic regression
big_write | Write an FBM to a file
block_size | Determine a correct value for the block.size parameter
covar_from_df | Numeric matrix from data frame
crossprod-method | Cross-product with a matrix
crossprod-method | Crossprod
diag-method | Methods for the FBM class
dim-method | Methods for the FBM class
FBM | Class FBM
FBM-class | Class FBM
FBM-methods | Methods for the FBM class
FBM.code256 | Class FBM.code256
FBM.code256-class | Class FBM.code256
FBM.code256_RC | Class FBM.code256
FBM_RC | Class FBM
get_beta | Combine sets of coefficients
length-method | Methods for the FBM class
pasteLoc | Get coordinates on plot
pcor | Partial correlation
plot.big_sp_list | Plot method
plot.big_SVD | Plot method
plot.mhtest | Plot method
predict.big_sp | Predict method
predict.big_sp_list | Predict method
predict.big_SVD | Scores of PCA
predict.mhtest | Predict method
sub_bk | Replace extension '.bk'
summary.big_sp_list | Summary method
tcrossprod-method | Cross-product with a matrix
tcrossprod-method | Tcrossprod
theme_bigstatsr | Theme ggplot2
typeof-method | Methods for the FBM class
without_downcast_warning | Temporarily disable downcast warning
[-method | Methods for the FBM class
[<--method | Methods for the FBM class