R: Basket Trial Analysis

# Basket Trial Analysis

## Documentation for package ‘basket’ version 0.10.11

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

basket-package | Basket Trial Analysis
basket | Create a Basket Trial Analysis
basket_map | Get the Basketwise Maximum A Posteriori Probability Matrix
basket_name | The Names of the Baskets
basket_pep | The Basketwise Posterior Exchangeability Probability Matrix
cluster_baskets | Get the Cluster Members of MEM Models
cluster_map | Get the Clusterwise Maximum A Posteriori Probability Matrix
cluster_membership | Cluster Baskets Based on the Posterior Exchangeabilities
cluster_pep | Get the Clusterwise Posterior Exchangeability Matrix
get_seed | Get the Current Random Seed
mem_exact | Fit the Exact MEM Model
mem_mcmc | Fit the MEM Model using MCMC
plot_density | Plot the Response Densities in Basket Trials
plot_map | Plot the Map Exchangeability of a Basket Trial
plot_mem | Plot the Prior, MAP, and PEP of a Basket Trial
plot_pep | Plot the Posterior Exchangeability of a Basket Trial
plot_pep_graph | Plot a Network Graph of the PEP Matrix
sample_posterior | Sample Posterior Samples from a Basket Trial
update_p0 | Update Full Bayes results with different p0 values
vemu | Summary Data from the Vemurafenib Study
vemu_wide | Summary Data from the Vemurafenib Study