R: Talking to 'Docker' and 'Singularity' Containers

# Talking to 'Docker' and 'Singularity' Containers

## Documentation for package ‘babelwhale’ version 1.2.0

- DESCRIPTION file
- Package NEWS
- Package README

## Help Pages

babelwhale | Talking to both Docker and Singularity containers from R
copy_file | Copy a file from a container to the host system
create_config | Backend configuration for containerisation
create_docker_config | Backend configuration for containerisation
create_singularity_config | Backend configuration for containerisation
get_default_config | Backend configuration for containerisation
list_docker_images | List docker containers
pull_container | Pull a container from dockerhub
read_file | Read a file from a container
run | Run a containerised command, and wait until finished
run_auto_mount | Run a containerised command with automatic mounting of files
set_default_config | Backend configuration for containerisation
singularity_image_path | Determine the cached path of singularity images
test_docker_installation | Tests whether docker is correctly installed and available
test_singularity_installation | Tests whether singularity is correctly installed and available