Package: archipelago
Title: Visualising Variant Set Association Test Results
Version: 0.1.0
License: MIT + file LICENSE
Language: en-GB
Authors@R: 
    person(
        given = "Dylan",
        family = "Lawless",
        email = "admin@switzerlandomics.ch",
        role = c("aut", "cre", "cph"),
        comment = c(ORCID = "0000-0001-8496-3725")
    )
Description: Provides a graphical method for joint visualisation of
    Variant Set Association Test (VSAT) results and individual variant
    association statistics. The Archipelago method assigns genomic
    coordinates to variant set statistics, allowing simultaneous display
    of variant-level and set-level signals in a unified plot. This supports
    interpretation of both collective and individual variant contributions
    in genetic association studies using variant aggregation approaches. For more see Lawless et al. (2026) <doi:10.1002/gepi.70025>. 
Encoding: UTF-8
Imports: ggplot2, dplyr
RoxygenNote: 7.3.3
VignetteBuilder: knitr
Suggests: knitr, rmarkdown, testthat (>= 3.0.0)
Config/testthat/edition: 3
Depends: R (>= 4.1.0)
LazyData: true
NeedsCompilation: no
Packaged: 2026-02-07 16:48:28 UTC; akira
Author: Dylan Lawless [aut, cre, cph] (ORCID:
    <https://orcid.org/0000-0001-8496-3725>)
Maintainer: Dylan Lawless <admin@switzerlandomics.ch>
Repository: CRAN
Date/Publication: 2026-02-10 21:00:02 UTC
Built: R 4.6.0; ; 2026-04-28 23:13:59 UTC; unix
