AntibioticPhyloseq      Antibiotic time course experiment.
AntibioticSmall         A subset of the antibiotic data
adaptiveGPCA-package    adaptiveGPCA: A package for structured
                        dimensionality reduction
adaptivegpca            Adaptive gPCA
estimateComponents      Estimate parameters in hierarchical model
gpca                    gPCA
gpcaFullFamily          Make a sequence of ordinations
inspectTaxonomy         Shiny gadget for tree/taxonomy inspection
plot.adaptivegpca       Plot an adaptivegpca object
print.adaptivegpca      Print an adaptivegpca object
processPhyloseq         Make the input matrices for adaptive gPCA
varianceOnEvecs         Variance along eigenvectors of Q
visualizeFullFamily     Shiny gadget for adaptive gPCA
