Package: acoRn
Title: Exclusion-Based Parentage Assignment Using Multilocus Genotype
        Data
Version: 0.1.0
Authors@R: c(
        person("Nikos", "Pechlivanis", , "npechlv@gmail.com", role = c("aut", "cre"), comment = c(ORCID = "0000-0003-2502-612X")),
        person("Fotis", "Psomopoulos", , "fpsom@certh.gr", role = c("aut"), comment = c(ORCID = "0000-0002-0222-4273")),
        person("Aristotelis", "Papageorgiou", , "apapage@mbg.duth.gr", role = c("aut"), comment = c(ORCID = "0000-0001-6657-7820"))
    )
Description: Exclusion-based parentage assignment is essential for studies in biodiversity conservation and breeding programs - Kang Huang, Rui Mi, Derek W Dunn, Tongcheng Wang, Baoguo Li, (2018), <doi:10.1534/genetics.118.301592>. The tool compares multilocus genotype data of potential parents and offspring, identifying likely parentage relationships while accounting for genotyping errors, missing data, and duplicate genotypes. 'acoRn' includes two algorithms: one generates synthetic genotype data based on user-defined parameters, while the other analyzes existing genotype data to identify parentage patterns. The package is versatile, applicable to diverse organisms, and offers clear visual outputs, making it a valuable resource for researchers. 
License: MIT + file LICENSE
Encoding: UTF-8
RoxygenNote: 7.3.2
Imports: data.table, stringr, stringi
Depends: R (>= 2.10)
LazyData: true
Suggests: testthat (>= 3.0.0)
Config/testthat/edition: 3
NeedsCompilation: no
Packaged: 2024-10-01 09:03:08 UTC; nikospech
Author: Nikos Pechlivanis [aut, cre] (<https://orcid.org/0000-0003-2502-612X>),
  Fotis Psomopoulos [aut] (<https://orcid.org/0000-0002-0222-4273>),
  Aristotelis Papageorgiou [aut]
    (<https://orcid.org/0000-0001-6657-7820>)
Maintainer: Nikos Pechlivanis <npechlv@gmail.com>
Repository: CRAN
Date/Publication: 2024-10-02 14:00:02 UTC
Built: R 4.6.0; ; 2026-04-27 21:27:47 UTC; unix
