CombineHittables        CombineHittables: Combine hittables.
ExportVirusDataFrame    ExportVirusDataFrame: Export processed
                        hittables and summary stats data frames
ExportVirusGt           ExportVirusGt: (Experimental) Export Graphical
                        Tables
ExportVirusPlot         Export Virusparies Plots
ImportVirusTable        ImportVirusTable: Import VirusHunterGatherer
                        hittables into R
SummarizeViralStats     SummarizeViralStats: Generate summary stats
                        outside of plot functions
VgConLenViolin          VgConLenViolin: Generate a Violinplot of contig
                        length for each group (Gatherer only)
VhgAddPhylum            VhgAddPhylum: extract Phylum information
VhgBoxplot              VhgBoxplot: Generate box plots comparing
                        E-values,identity or contig length (Gatherer
                        only) for each virus group
VhgGetSubject           VhgGetSubject: Process and Count Viral Subjects
                        within Groups
VhgIdenFacetedScatterPlot
                        VhgIdenFacetedScatterPlot: Create a scatter
                        plot of Viral refseq identity vs. -log10 of
                        viral refseq E-value.
VhgIdentityScatterPlot
                        VhgIdentityScatterPlot: Scatter plot for refseq
                        identity vs -log10 of refseq E-value
VhgPreprocessTaxa       VhgPreprocessTaxa: preprocess
                        ViralRefSeq_taxonomy elements
VhgRunsBarplot          VhgRunsBarplot: Generate a bar plot showing the
                        number of data sets with unique runs found for
                        each Virus group.
VhgRunsTable            VhgRunsTable: Generate a gt summary table of
                        unique runs for each virus group
VhgSubsetHittable       VhgSubsetHittable: Filter VirusHunter and
                        VirusGatherer hittables
VhgSumHitsBarplot       VhgSumHitsBarplot: Generate a bar plot showing
                        the sum of reads/contigs for each virus family
VhgTabularRasa          VhgTabularRasa: Generate Custom Formatted
                        Graphical Tables
Virusparies             Virusparies Package
get_plot_parameters     Internal function to set default title and
                        cutoff in boxplot function
