# Generated by roxygen2: do not edit by hand

S3method(plot,ClusteredTrends)
S3method(plot,TcGSA)
S3method(print,ClusteredTrends)
S3method(print,TcGSA)
S3method(print,summary.TcGSA)
S3method(summary,TcGSA)
export(TcGSA.LR)
export(TcGSA.LR.parallel)
export(clustTrend)
export(dchisqmix)
export(multtest.TcGSA)
export(pchisqmix)
export(plot1GS)
export(plotFit.GS)
export(plotMultipleGS)
export(plotPat.1GS)
export(plotPat.TcGSA)
export(plotSelect.GS)
export(qchisqmix)
export(rchisqmix)
export(signifLRT.TcGSA)
import(ggplot2)
import(reshape2)
importFrom(GSA,GSA.read.gmt)
importFrom(cluster,agnes)
importFrom(cluster,clusGap)
importFrom(cluster,maxSE)
importFrom(cowplot,plot_grid)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,hsv)
importFrom(grDevices,rainbow)
importFrom(grDevices,rgb)
importFrom(graphics,abline)
importFrom(graphics,axis)
importFrom(graphics,barplot)
importFrom(graphics,hist)
importFrom(graphics,image)
importFrom(graphics,legend)
importFrom(graphics,lines)
importFrom(graphics,mtext)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(graphics,plot.new)
importFrom(graphics,rect)
importFrom(graphics,text)
importFrom(graphics,title)
importFrom(gtools,invalid)
importFrom(gtools,mixedorder)
importFrom(lme4,lmer)
importFrom(multtest,mt.rawp2adjp)
importFrom(splines,ns)
importFrom(stats,as.dendrogram)
importFrom(stats,as.dist)
importFrom(stats,as.formula)
importFrom(stats,cutree)
importFrom(stats,density)
importFrom(stats,deviance)
importFrom(stats,dist)
importFrom(stats,fitted)
importFrom(stats,hclust)
importFrom(stats,lm)
importFrom(stats,median)
importFrom(stats,order.dendrogram)
importFrom(stats,quantile)
importFrom(stats,rchisq)
importFrom(stats,reorder)
importFrom(stats,sd)
importFrom(stats,var)
importFrom(stringr,str_split)
importFrom(stringr,str_trim)
importFrom(utils,write.table)
