R: Transparent Assessment Framework for Reproducible Research

# Transparent Assessment Framework for Reproducible Research

## Documentation for package ‘TAF’ version 4.3.1

- DESCRIPTION file
- Package NEWS

## Help Pages

TAF-package | Transparent Assessment Framework for Reproducible Research
catage.long | Catch at Age in Long Format
catage.taf | Catch at Age in TAF Format
catage.wide | Catch at Age in Wide Format
catage.xtab | Catch at Age in Crosstab Format
check.software | Check SOFTWARE.bib Against Global Packages
clean | Clean TAF Directories
clean.boot | Clean Boot Directory
clean.data | Clean Data
clean.library | Clean TAF Library
clean.software | Clean TAF Software
convert.spaces | Convert Spaces
cp | Copy Files
ddim | Data Dimensions
deps | Dependencies of a Workflow
detach.packages | Detach Packages
dir.tree | Directory Tree
div | Divide Columns
dos2unix | Convert Line Endings
download | Download File
download.github | Download GitHub Repository
draft.data | Draft DATA.bib
draft.readme | Draft Readme
draft.software | Draft SOFTWARE.bib
file.encoding | File Encoding
flr2taf | Convert FLR Table to TAF Format
get.remote.sha | Get Remote SHA
git.repo | Git Repo
install.deps | Install Dependencies
is.r.package | Is R Package
latin1.to.utf8 | Convert File Encoding
lim | Axis Limits
line.endings | Line Endings
linreg | Linear Regression
long2taf | Convert Long Table to TAF Format
long2xtab | Convert Long Table to Crosstab Format
make | Run R Script if Needed
make.all | Run All TAF Scripts as Needed
make.taf | Run TAF Script if Needed
makeAll | Run All TAF Scripts as Needed
makeTAF | Run TAF Script if Needed
mkdir | Create Directory
msg | Show Message
os | Operating System
os.linux | Operating System
os.macos | Operating System
os.unix | Operating System
os.windows | Operating System
pdeps | Dependencies of a Package
period | Period
plus | Rename Plus Group Column
read.bib | Read Metadata Entries
read.taf | Read TAF Table
rmdir | Remove Empty Directory
rnd | Round Columns
sam2taf | Convert SAM Table to TAF Format
source.all | Run All TAF Scripts
source.dir | Source Directory
source.taf | Run TAF Script
sourceAll | Run All TAF Scripts
sourceDir | Source Directory
sourceTAF | Run TAF Script
summary.taf | Summary Results in TAF Format
TAF | Transparent Assessment Framework for Reproducible Research
taf.blue | TAF Colors
taf.boot | Boot TAF Analysis
taf.boot.path | Construct Boot Path
taf.bootstrap | Boot TAF Analysis
taf.colors | TAF Colors
taf.dark | TAF Colors
taf.data.path | Construct Boot Data Path
taf.example | TAF Example
taf.green | TAF Colors
taf.install | TAF Install
taf.libPaths | Add TAF Library Path
taf.libraries | TAF Libraries
taf.library | TAF Library
taf.light | TAF Colors
taf.orange | TAF Colors
taf.png | PNG Device
taf.session | TAF Session
taf.skeleton | TAF Skeleton
taf.sources | List Sources
taf.unzip | Unzip File
taf2html | Convert TAF Table to HTML
taf2long | Convert TAF Table to Long Format
taf2xtab | Convert TAF Table to Crosstab Format
tafpng | PNG Device
tt | TAF Transpose
unix2dos | Convert Line Endings
utf8.to.latin1 | Convert File Encoding
wide2long | Convert Wide Table to Long Format
write.taf | Write TAF Table
xtab2long | Convert Crosstab Table to Long Format
xtab2taf | Convert Crosstab Table to TAF Format
zoom | Zoom
zoom.trellis | Zoom