Package: Sysrecon
Type: Package
Title: Systematical Metabolic Reconstruction
Version: 0.1.3
Authors@R: 
    c(person(given = "Shilin",
             family = "Ouyang",
             role = c("aut", "cre"),
             email = "ouyangshilin@hnu.edu.cn"),
      person(given = "Zihao",
             family = "Li",
             role = "aut"),
      person(given = "Jiamin",
             family = "Hu",
             role = "aut"),
      person(given = "Miyuan",
             family = "Cao",
             role = "aut"),
      person(given = "Feng",
             family = "Yu",
             role = "aut"),
      person(given = "Longfei",
             family = "Mao",
             role = "aut"),
      person("RStudio", 
             role = c("cph", "fnd")))
Description: In the past decade, genome-scale metabolic reconstructions have widely been 
    used to comprehend the systems biology of metabolic pathways within an organism. 
    Different GSMs are constructed using various techniques that 
    require distinct steps, but the input data, information conversion and software tools
    are neither concisely defined nor mathematically or programmatically formulated
    in a context-specific manner.The tool that quantitatively and qualitatively specifies
    each reconstruction steps and can generate a template list of reconstruction steps dynamically
    selected from a reconstruction step reservoir, constructed based on all available published papers.
License: GPL-3
Imports: ape, dplyr, ggplot2, ggtree, magrittr, methods, patchwork,
        plyr, RColorBrewer, rlang, SnowballC, stats, stringr, tm, utils
Config/Needs/website: pkgdown
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.2.2
Depends: R (>= 3.5.0)
URL: https://oyshilin.github.io/sysrecon/
NeedsCompilation: no
Packaged: 2023-02-20 08:32:40 UTC; ouyangshilin
Author: Shilin Ouyang [aut, cre],
  Zihao Li [aut],
  Jiamin Hu [aut],
  Miyuan Cao [aut],
  Feng Yu [aut],
  Longfei Mao [aut],
  RStudio [cph, fnd]
Maintainer: Shilin Ouyang <ouyangshilin@hnu.edu.cn>
Repository: CRAN
Date/Publication: 2023-02-20 08:50:02 UTC
Built: R 4.6.0; ; 2026-04-29 08:40:09 UTC; unix
