all_preserved           Indestructible fossils
apply_niche             apply niche model
apply_taphonomy         model taphonomic effects
as_char_mat             construct character matrix
bounded_niche           define niche from boundaries
discrete_gradient       construct discretized gradient
discrete_niche          niche from discrete data
gradient_from_data      gradient or taphonomic conditions from data
is_char_mat             validity of character matrices
last_occ                last occurrence of taxon
ornstein_uhlenbeck      simulate ornstein-uhlenbeck (OU) process
ornstein_uhlenbeck_sl   simulate ornstein-uhlenbeck (OU) process
                        (specimen level)
p3                      simulate Poisson point process
p3_var_rate             simulate variable rate Poisson point process
perfect_preservation    perfect taphonomic conditions
plot.pre_paleoTS        plot pre-paleoTS objects
prob_remove             probabilistic removal of elements
random_walk             simulate (un)biased random walk
random_walk_sl          simulate (un)biased random walk (specimen
                        level)
range_offset            range offset of taxon
reduce_to_paleoTS       reduce pre-paleoTS format to paleoTS
rej_samp                random numbers from rejection sampling
scenarioA               example data, emulates scenario A from Hohmann
                        et al. (2024)
snd_niche               simple niche model
stasis                  simulate phenotypic stasis
stasis_sl               simulate phenotypic stasis (specimen level)
strat_filter            generate basic stratigraphic filter
strict_stasis_sl        simulate strict phenotypic stasis (specimen
                        level)
thin                    thin a series of events (e.g. fossil
                        occurrences)
trivial_gradient        model absence of environmental gradients
trivial_niche           trivial niche model
