Package: SimReg
Type: Package
Title: Similarity Regression
Version: 3.4
Date: 2024-02-20
Encoding: UTF-8
Author: Daniel Greene
Maintainer: Daniel Greene <dg333@cam.ac.uk>
Description: Similarity regression,
    evaluating the probability of association between sets of ontological terms
    and binary response vector. A no-association model is compared with one in which
    the log odds of a true response is linked to the semantic similarity
    between terms and a latent characteristic ontological profile - 'Phenotype Similarity Regression for Identifying the Genetic Determinants of Rare Diseases', Greene et al 2016 <doi:10.1016/j.ajhg.2016.01.008>. 
License: GPL (>= 2)
Imports: Rcpp (>= 0.11.1), ontologyIndex (>= 2.0), ontologySimilarity
        (>= 2.0), ontologyPlot
LinkingTo: Rcpp
Depends: R (>= 3.0.0)
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
RoxygenNote: 7.3.1
NeedsCompilation: yes
Packaged: 2024-02-21 03:30:03 UTC; dg
Repository: CRAN
Date/Publication: 2024-02-21 04:00:02 UTC
Built: R 4.6.0; x86_64-apple-darwin20; 2026-04-27 12:50:18 UTC; unix
Archs: SimReg.so.dSYM
