# Generated by roxygen2: do not edit by hand

S3method("[",generic.data.table)
S3method(as.data.frame,generic.data.table)
S3method(as.matrix,generic.data.table)
S3method(dimnames,generic.data.table)
S3method(print,generic.data.table)
S3method(print,summary.SQM)
S3method(print,summary.SQMbunch)
S3method(print,summary.SQMlite)
S3method(rbind,generic.data.table)
S3method(summary,SQM)
S3method(summary,SQMbunch)
S3method(summary,SQMlite)
export(SQM_to_microeco)
export(SQM_to_phyloseq)
export(combineSQM)
export(combineSQMlite)
export(create_bin)
export(exportBins)
export(exportContigs)
export(exportKrona)
export(exportORFs)
export(exportPathway)
export(exportTable)
export(find_redundant_contigs)
export(loadSQM)
export(loadSQMlite)
export(mostAbundant)
export(mostVariable)
export(plotBars)
export(plotBins)
export(plotFunctions)
export(plotHeatmap)
export(plotTaxonomy)
export(remove_contigs_from_bin)
export(renameSamples)
export(rowMaxs)
export(rowMins)
export(seqvec2fasta)
export(subsetBins)
export(subsetContigs)
export(subsetFun)
export(subsetORFs)
export(subsetRand)
export(subsetSamples)
export(subsetTax)
importFrom(Biostrings,BStringSet)
importFrom(Biostrings,DNAStringSet)
importFrom(Biostrings,readBStringSet)
importFrom(Biostrings,readDNAStringSet)
importFrom(Biostrings,writeXStringSet)
importFrom(data.table,data.table)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,png)
importFrom(graphics,plot)
importFrom(graphics,rasterImage)
importFrom(graphics,text)
importFrom(stats,aggregate)
importFrom(stats,median)
importFrom(stats,sd)
importFrom(stats,setNames)
importFrom(utils,combn)
importFrom(utils,getFromNamespace)
importFrom(utils,globalVariables)
importFrom(utils,installed.packages)
importFrom(utils,read.table)
importFrom(utils,tail)
importFrom(utils,write.table)
importFrom(zip,unzip)
importFrom(zip,zip_list)
