R: SEER and Atomic Bomb Survivor Data Analysis Tools

# SEER and Atomic Bomb Survivor Data Analysis Tools

## Documentation for package ‘SEERaBomb’ version 2019.2

- DESCRIPTION file
- Package NEWS

## Help Pages

SEERaBomb-package | SEER and A-Bomb Data Analysis Tools
csd | Cancer risk vs years Since Diagnosis of other cancer
esd | Event vs years Since Diagnosis
getDF | Converts a seerSet$L series to a data.frame
getFields | Get fields from SEER SAS file
incidAbomb | Computes A-bomb incidences
incidSEER | Computes SEER incidences
mapCancs | Map ICD9 and ICD-O3 codes to cancers
mapCODs | Map CODs to strings
mapRegs | Map registry codes to acronyms
mapTrts | Map treatment codes to factor
mk2D | Make 2D-spline fits of incidences
mkAbomb | Make Abomb Binaries
mkDemographics | Make Demographics Tables
mkExcelCsd | Make RR Excel file from csd output
mkLT | Make Life Tables
mkMrt | Make mortality binaries
mkMrtLocal | Make mortality binaries from local HMD data files
mkSEER | Make R binaries of SEER data.
msd | Mortality vs years Since Diagnosis
nvsr | National Vital Statistic Report (nvsr) Data
nvsr01 | National Vital Statistic Report (nvsr01) Data
p2s | Primary to Secondary
pickFields | Pick SEER fields of interest
plot2D | Plot 2D cancer incidence splines
riskVsAge | Second cancer risk vs attained age after first cancer
seerSet | Join SEER cancers and PY
seerStats | Summarize SEER data.
Sigurdson | Chromosome translocation versus age data
simSeerSet | Simulate SEER cancers and population person years
simSurv | Simulate Survival Times
stdUS | The standard population of the US in 2000
summary.seerSet | Summary of seerSet object