# Generated by roxygen2: do not edit by hand

S3method(as.matrix,multiPhylo)
S3method(as.vector,phylo)
S3method(coef,cv.tropsvm)
S3method(coef,tropsvm)
S3method(plot,troppca)
S3method(predict,cv.tropsvm)
S3method(predict,tropsvm)
S3method(summary,cv.tropsvm)
export(as.matrix.multiPhylo)
export(as.vector.phylo)
export(coef.cv.tropsvm)
export(coef.tropsvm)
export(cv.tropsvm)
export(linsp_to_poly)
export(plot.troppca)
export(predict.cv.tropsvm)
export(predict.tropsvm)
export(read.nexus.to.data.matrix)
export(read.tree.to.data.matrix)
export(summary.cv.tropsvm)
export(tropFW)
export(tropdet)
export(troppca.linsp)
export(troppca.linsp2poly)
export(troppca.poly)
export(tropproj.linsp)
export(tropproj.poly)
export(tropsvm)
importFrom(RcppAlgos,comboGeneral)
importFrom(Rfast,colMins)
importFrom(Rfast,colsums)
importFrom(Rfast,eachrow)
importFrom(Rfast,rowMaxs)
importFrom(Rfast,rowMins)
importFrom(Rfast,rowSort)
importFrom(ape,chronos)
importFrom(ape,cophenetic.phylo)
importFrom(ape,read.nexus)
importFrom(ape,read.tree)
importFrom(ape,root)
importFrom(caret,createFolds)
importFrom(graphics,legend)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(graphics,points)
importFrom(graphics,segments)
importFrom(lpSolve,lp)
importFrom(lpSolve,lp.assign)
importFrom(lpSolveAPI,get.objective)
importFrom(lpSolveAPI,get.variables)
importFrom(lpSolveAPI,make.lp)
importFrom(lpSolveAPI,set.column)
importFrom(lpSolveAPI,set.constr.type)
importFrom(lpSolveAPI,set.objfn)
importFrom(lpSolveAPI,set.rhs)
importFrom(lpSolveAPI,solve.lpExtPtr)
importFrom(parallel,clusterExport)
importFrom(parallel,detectCores)
importFrom(parallel,makeCluster)
importFrom(parallel,parLapply)
importFrom(parallel,setDefaultCluster)
importFrom(parallel,stopCluster)
importFrom(stats,runif)
