Package: Rsearch
Type: Package
Title: Processing and Analyzing Amplicon Sequence Data
Version: 1.0.0
Authors@R: c(
    person("Cassandra", "Stamsaas", email = "cassandra.hjortdahl@nmbu.no", role = c("cre", "aut")),
    person("Lars", "Snipen", email = "lars.snipen@nmbu.no", role = "aut"),
    person("Torbjørn", "Rognes", email = "torognes@ifi.uio.no", role = "aut"),
    person("Hilde", "Vinje", email = "hilde.vinje@nmbu.no", role = "aut"))
Maintainer: Cassandra Stamsaas <cassandra.hjortdahl@nmbu.no>
Description: Processing and analysis of targeted sequencing data. The package provides a user-friendly interface for core 'VSEARCH' (Rognes et al. (2016), <doi:10.7717/peerj.2584>) functions, in addition to tools for visualization and parameter tuning. 
License: GPL (>= 3)
Encoding: UTF-8
Imports: ape (>= 5.8.1), cowplot (>= 1.1.3), dplyr, ggExtra (>=
        0.10.1), ggplot2 (>= 3.5.1), microseq (>= 2.1.6), phyloseq (>=
        1.50.0), RColorBrewer (>= 1.1.3), readr (>= 2.1.5), stats,
        stringr (>= 1.5.1), tibble (>= 3.2.1), tidyr (>= 1.3.1)
Suggests: rmarkdown, testthat (>= 3.0.0), withr (>= 3.0.2)
Config/testthat/edition: 3
RoxygenNote: 7.3.3
URL: https://cassandrahjo.github.io/Rsearch/,
        https://github.com/CassandraHjo/Rsearch/
BugReports: https://github.com/CassandraHjo/Rsearch/issues/
Depends: R (>= 4.1)
Config/Needs/website: rmarkdown
NeedsCompilation: no
Packaged: 2025-10-22 05:46:02 UTC; cassandrahjortdahl
Author: Cassandra Stamsaas [cre, aut],
  Lars Snipen [aut],
  Torbjørn Rognes [aut],
  Hilde Vinje [aut]
Repository: CRAN
Date/Publication: 2025-10-26 18:40:14 UTC
Built: R 4.6.0; ; 2026-04-30 02:44:01 UTC; unix
