R: Download Content from NCBI Databases

# Download Content from NCBI Databases

## Documentation for package ‘RISmed’ version 2.3.0

- DESCRIPTION file
- Package NEWS

## Help Pages

A C D E G H I K L M N P Q R S T V Y

RISmed-package | Download content from NCBI databases.

## -- A --

AbstractText | Extracts 'AbstractText' from 'Medline' object.
AbstractText-method | ~~ Methods for Function 'AbstractText' in Package 'RISmed' ~~
AbstractText-methods | ~~ Methods for Function 'AbstractText' in Package 'RISmed' ~~
Affiliation | Extracts 'Affiliation' from 'Medline' object.
Affiliation-method | ~~ Methods for Function 'Affiliation' in Package 'RISmed' ~~
Affiliation-methods | ~~ Methods for Function 'Affiliation' in Package 'RISmed' ~~
ArticleId | Extracts 'ArticleId' from 'Medline' object.
ArticleId-method | ~~ Methods for Function 'ArticleId' in Package 'RISmed' ~~
ArticleId-methods | ~~ Methods for Function 'ArticleId' in Package 'RISmed' ~~
ArticleTitle | Extracts 'ArticleTitle' from 'Medline' object.
ArticleTitle-method | ~~ Methods for Function 'ArticleTitle' in Package 'RISmed' ~~
ArticleTitle-methods | ~~ Methods for Function 'ArticleTitle' in Package 'RISmed' ~~
Author | Extracts 'Author' from 'Medline' object.
Author-method | ~~ Methods for Function 'Author' in Package 'RISmed' ~~
Author-methods | ~~ Methods for Function 'Author' in Package 'RISmed' ~~

## -- C --

c-method | Concatenate Medline
Citations | List of citing article titles where listed in PubMed.
Citations-method | ~~ Methods for Function 'Citations' in Package 'RISmed' ~~
Citations-methods | ~~ Methods for Function 'Citations' in Package 'RISmed' ~~
COIStatement | Extracts 'COIStatement' from 'Medline' object.
COIStatement-method | ~~ Methods for Function 'COIStatement' in Package 'RISmed' ~~
COIStatement-methods | ~~ Methods for Function 'COIStatement' in Package 'RISmed' ~~
CopyrightInformation | Extracts 'CopyrightInformation' from 'Medline' object.
CopyrightInformation-method | ~~ Methods for Function 'CopyrightInformation' in Package 'RISmed' ~~
CopyrightInformation-methods | ~~ Methods for Function 'CopyrightInformation' in Package 'RISmed' ~~
Country | Extracts 'Country' from 'Medline' object.
Country-method | ~~ Methods for Function 'Country' in Package 'RISmed' ~~
Country-methods | ~~ Methods for Function 'Country' in Package 'RISmed' ~~

## -- D --

DayAccepted | Extracts 'DayAccepted' from 'Medline' object.
DayAccepted-method | ~~ Methods for Function 'DayAccepted' in Package 'RISmed' ~~
DayAccepted-methods | ~~ Methods for Function 'DayAccepted' in Package 'RISmed' ~~
DayArticleDate | Extracts 'DayArticleDate' from 'Medline' object.
DayArticleDate-method | ~~ Methods for Function 'DayArticleDate' in Package 'RISmed' ~~
DayArticleDate-methods | ~~ Methods for Function 'DayArticleDate' in Package 'RISmed' ~~
DayEntrez | Extracts 'DayEntrez' from 'Medline' object.
DayEntrez-method | ~~ Methods for Function 'DayEntrez' in Package 'RISmed' ~~
DayEntrez-methods | ~~ Methods for Function 'DayEntrez' in Package 'RISmed' ~~
DayEpublish | Extracts 'DayEpublish' from 'Medline' object.
DayEpublish-method | ~~ Methods for Function 'DayEpublish' in Package 'RISmed' ~~
DayEpublish-methods | ~~ Methods for Function 'DayEpublish' in Package 'RISmed' ~~
DayMedline | Extracts 'DayMedline' from 'Medline' object.
DayMedline-method | ~~ Methods for Function 'DayMedline' in Package 'RISmed' ~~
DayMedline-methods | ~~ Methods for Function 'DayMedline' in Package 'RISmed' ~~
DayPmc | Extracts 'DayPmc' from 'Medline' object.
DayPmc-method | ~~ Methods for Function 'DayPmc' in Package 'RISmed' ~~
DayPmc-methods | ~~ Methods for Function 'DayPmc' in Package 'RISmed' ~~
DayPpublish | Extracts 'DayPpublish' from 'Medline' object.
DayPpublish-method | ~~ Methods for Function 'DayPpublish' in Package 'RISmed' ~~
DayPpublish-methods | ~~ Methods for Function 'DayPpublish' in Package 'RISmed' ~~
DayPubDate | Extracts 'DayPubDate' from 'Medline' object.
DayPubDate-method | ~~ Methods for Function 'DayPubDate' in Package 'RISmed' ~~
DayPubDate-methods | ~~ Methods for Function 'DayPubDate' in Package 'RISmed' ~~
DayPubmed | Extracts 'DayPubmed' from 'Medline' object.
DayPubmed-method | ~~ Methods for Function 'DayPubmed' in Package 'RISmed' ~~
DayPubmed-methods | ~~ Methods for Function 'DayPubmed' in Package 'RISmed' ~~
DayReceived | Extracts 'DayReceived' from 'Medline' object.
DayReceived-method | ~~ Methods for Function 'DayReceived' in Package 'RISmed' ~~
DayReceived-methods | ~~ Methods for Function 'DayReceived' in Package 'RISmed' ~~
DayRevised | Extracts 'DayRevised' from 'Medline' object.
DayRevised-method | ~~ Methods for Function 'DayRevised' in Package 'RISmed' ~~
DayRevised-methods | ~~ Methods for Function 'DayRevised' in Package 'RISmed' ~~
DOI | Extracts 'DOI' from 'Medline' object.
DOI-method | ~~ Methods for Function 'DOI' in Package 'RISmed' ~~
DOI-methods | ~~ Methods for Function 'DOI' in Package 'RISmed' ~~

## -- E --

ELocationID | Extracts 'ELocationID' from 'Medline' object.
ELocationID-method | ~~ Methods for Function 'ELocationID' in Package 'RISmed' ~~
ELocationID-methods | ~~ Methods for Function 'ELocationID' in Package 'RISmed' ~~
EUtilsGet | Results of an NCBI EUtils query
EUtilsQuery | Construct URL to make NCBI EUtils query
EUtilsQuery-class | Construct URL to make NCBI EUtils query
EUtilsSummary | Get summary of NCBI EUtils query
EUtilsSummary-class | Class '"EUtilsSummary"'

## -- G --

GrantID | Extracts list of 'GrantID' info 'Medline' object including 'GrantID' and 'GrantAgency' where listed in PubMed.
GrantID-method | ~~ Methods for Function 'GrantID' in Package 'RISmed' ~~
GrantID-methods | ~~ Methods for Function 'GrantID' in Package 'RISmed' ~~

## -- H --

HourAccepted | Extracts 'HourAccepted' from 'Medline' object.
HourAccepted-method | ~~ Methods for Function 'HourAccepted' in Package 'RISmed' ~~
HourAccepted-methods | ~~ Methods for Function 'HourAccepted' in Package 'RISmed' ~~
HourEntrez | Extracts 'HourEntrez' from 'Medline' object.
HourEntrez-method | ~~ Methods for Function 'HourEntrez' in Package 'RISmed' ~~
HourEntrez-methods | ~~ Methods for Function 'HourEntrez' in Package 'RISmed' ~~
HourEpublish | Extracts 'HourEpublish' from 'Medline' object.
HourEpublish-method | ~~ Methods for Function 'HourEpublish' in Package 'RISmed' ~~
HourEpublish-methods | ~~ Methods for Function 'HourEpublish' in Package 'RISmed' ~~
HourMedline | Extracts 'HourMedline' from 'Medline' object.
HourMedline-method | ~~ Methods for Function 'HourMedline' in Package 'RISmed' ~~
HourMedline-methods | ~~ Methods for Function 'HourMedline' in Package 'RISmed' ~~
HourPmc | Extracts 'HourPmc' from 'Medline' object.
HourPmc-method | ~~ Methods for Function 'HourPmc' in Package 'RISmed' ~~
HourPmc-methods | ~~ Methods for Function 'HourPmc' in Package 'RISmed' ~~
HourPpublish | Extracts 'HourPpublish' from 'Medline' object.
HourPpublish-method | ~~ Methods for Function 'HourPpublish' in Package 'RISmed' ~~
HourPpublish-methods | ~~ Methods for Function 'HourPpublish' in Package 'RISmed' ~~
HourPubmed | Extracts 'HourPubmed' from 'Medline' object.
HourPubmed-method | ~~ Methods for Function 'HourPubmed' in Package 'RISmed' ~~
HourPubmed-methods | ~~ Methods for Function 'HourPubmed' in Package 'RISmed' ~~
HourReceived | Extracts 'HourReceived' from 'Medline' object.
HourReceived-method | ~~ Methods for Function 'HourReceived' in Package 'RISmed' ~~
HourReceived-methods | ~~ Methods for Function 'HourReceived' in Package 'RISmed' ~~

## -- I --

ISOAbbreviation | Extracts 'ISOAbbreviation' from 'Medline' object.
ISOAbbreviation-method | ~~ Methods for Function 'ISOAbbreviation' in Package 'RISmed' ~~
ISOAbbreviation-methods | ~~ Methods for Function 'ISOAbbreviation' in Package 'RISmed' ~~
ISSN | Extracts 'ISSN' from 'Medline' object.
ISSN-method | ~~ Methods for Function 'ISSN' in Package 'RISmed' ~~
ISSN-methods | ~~ Methods for Function 'ISSN' in Package 'RISmed' ~~
ISSNLinking | Extracts 'ISSNLinking' from 'Medline' object.
ISSNLinking-method | ~~ Methods for Function 'ISSNLinking' in Package 'RISmed' ~~
ISSNLinking-methods | ~~ Methods for Function 'ISSNLinking' in Package 'RISmed' ~~
Issue | Extracts 'Issue' from 'Medline' object.
Issue-method | ~~ Methods for Function 'Issue' in Package 'RISmed' ~~
Issue-methods | ~~ Methods for Function 'Issue' in Package 'RISmed' ~~

## -- K --

Keywords | Extracts list of 'Keywords' info from 'Medline' object.
Keywords-method | ~~ Methods for Function 'Keywords' in Package 'RISmed' ~~
Keywords-methods | ~~ Methods for Function 'Keywords' in Package 'RISmed' ~~

## -- L --

Language | Extracts 'Language' from 'Medline' object.
Language-method | ~~ Methods for Function 'Language' in Package 'RISmed' ~~
Language-methods | ~~ Methods for Function 'Language' in Package 'RISmed' ~~

## -- M --

Medline | Class '"Medline"'
Medline-class | Class '"Medline"'
MedlinePgn | Extracts 'MedlinePgn' from 'Medline' object.
MedlinePgn-method | ~~ Methods for Function 'MedlinePgn' in Package 'RISmed' ~~
MedlinePgn-methods | ~~ Methods for Function 'MedlinePgn' in Package 'RISmed' ~~
MedlineTA | Extracts 'MedlineTA' from 'Medline' object.
MedlineTA-method | ~~ Methods for Function 'MedlineTA' in Package 'RISmed' ~~
MedlineTA-methods | ~~ Methods for Function 'MedlineTA' in Package 'RISmed' ~~
Mesh | Extracts 'Mesh' headings from 'Medline' object.
Mesh-method | ~~ Methods for Function 'Mesh' in Package 'RISmed' ~~
Mesh-methods | ~~ Methods for Function 'Mesh' in Package 'RISmed' ~~
MinuteAccepted | Extracts 'MinuteAccepted' from 'Medline' object.
MinuteAccepted-method | ~~ Methods for Function 'MinuteAccepted' in Package 'RISmed' ~~
MinuteAccepted-methods | ~~ Methods for Function 'MinuteAccepted' in Package 'RISmed' ~~
MinuteEntrez | Extracts 'MinuteEntrez' from 'Medline' object.
MinuteEntrez-method | ~~ Methods for Function 'MinuteEntrez' in Package 'RISmed' ~~
MinuteEntrez-methods | ~~ Methods for Function 'MinuteEntrez' in Package 'RISmed' ~~
MinuteEpublish | Extracts 'MinuteEpublish' from 'Medline' object.
MinuteEpublish-method | ~~ Methods for Function 'MinuteEpublish' in Package 'RISmed' ~~
MinuteEpublish-methods | ~~ Methods for Function 'MinuteEpublish' in Package 'RISmed' ~~
MinuteMedline | Extracts 'MinuteMedline' from 'Medline' object.
MinuteMedline-method | ~~ Methods for Function 'MinuteMedline' in Package 'RISmed' ~~
MinuteMedline-methods | ~~ Methods for Function 'MinuteMedline' in Package 'RISmed' ~~
MinutePmc | Extracts 'MinutePmc' from 'Medline' object.
MinutePmc-method | ~~ Methods for Function 'MinutePmc' in Package 'RISmed' ~~
MinutePmc-methods | ~~ Methods for Function 'MinutePmc' in Package 'RISmed' ~~
MinutePpublish | Extracts 'MinutePpublish' from 'Medline' object.
MinutePpublish-method | ~~ Methods for Function 'MinutePpublish' in Package 'RISmed' ~~
MinutePpublish-methods | ~~ Methods for Function 'MinutePpublish' in Package 'RISmed' ~~
MinutePubmed | Extracts 'MinutePubmed' from 'Medline' object.
MinutePubmed-method | ~~ Methods for Function 'MinutePubmed' in Package 'RISmed' ~~
MinutePubmed-methods | ~~ Methods for Function 'MinutePubmed' in Package 'RISmed' ~~
MinuteReceived | Extracts 'MinuteReceived' from 'Medline' object.
MinuteReceived-method | ~~ Methods for Function 'MinuteReceived' in Package 'RISmed' ~~
MinuteReceived-methods | ~~ Methods for Function 'MinuteReceived' in Package 'RISmed' ~~
MonthAccepted | Extracts 'MonthAccepted' from 'Medline' object.
MonthAccepted-method | ~~ Methods for Function 'MonthAccepted' in Package 'RISmed' ~~
MonthAccepted-methods | ~~ Methods for Function 'MonthAccepted' in Package 'RISmed' ~~
MonthArticleDate | Extracts 'MonthArticleDate' from 'Medline' object.
MonthArticleDate-method | ~~ Methods for Function 'MonthArticleDate' in Package 'RISmed' ~~
MonthArticleDate-methods | ~~ Methods for Function 'MonthArticleDate' in Package 'RISmed' ~~
MonthEntrez | Extracts 'MonthEntrez' from 'Medline' object.
MonthEntrez-method | ~~ Methods for Function 'MonthEntrez' in Package 'RISmed' ~~
MonthEntrez-methods | ~~ Methods for Function 'MonthEntrez' in Package 'RISmed' ~~
MonthEpublish | Extracts 'MonthEpublish' from 'Medline' object.
MonthEpublish-method | ~~ Methods for Function 'MonthEpublish' in Package 'RISmed' ~~
MonthEpublish-methods | ~~ Methods for Function 'MonthEpublish' in Package 'RISmed' ~~
MonthMedline | Extracts 'MonthMedline' from 'Medline' object.
MonthMedline-method | ~~ Methods for Function 'MonthMedline' in Package 'RISmed' ~~
MonthMedline-methods | ~~ Methods for Function 'MonthMedline' in Package 'RISmed' ~~
MonthPmc | Extracts 'MonthPmc' from 'Medline' object.
MonthPmc-method | ~~ Methods for Function 'MonthPmc' in Package 'RISmed' ~~
MonthPmc-methods | ~~ Methods for Function 'MonthPmc' in Package 'RISmed' ~~
MonthPpublish | Extracts 'MonthPpublish' from 'Medline' object.
MonthPpublish-method | ~~ Methods for Function 'MonthPpublish' in Package 'RISmed' ~~
MonthPpublish-methods | ~~ Methods for Function 'MonthPpublish' in Package 'RISmed' ~~
MonthPubDate | Extracts 'MonthPubDate' from 'Medline' object.
MonthPubDate-method | ~~ Methods for Function 'MonthPubDate' in Package 'RISmed' ~~
MonthPubDate-methods | ~~ Methods for Function 'MonthPubDate' in Package 'RISmed' ~~
MonthPubmed | Extracts 'MonthPubmed' from 'Medline' object.
MonthPubmed-method | ~~ Methods for Function 'MonthPubmed' in Package 'RISmed' ~~
MonthPubmed-methods | ~~ Methods for Function 'MonthPubmed' in Package 'RISmed' ~~
MonthReceived | Extracts 'MonthReceived' from 'Medline' object.
MonthReceived-method | ~~ Methods for Function 'MonthReceived' in Package 'RISmed' ~~
MonthReceived-methods | ~~ Methods for Function 'MonthReceived' in Package 'RISmed' ~~
MonthRevised | Extracts 'MonthRevised' from 'Medline' object.
MonthRevised-method | ~~ Methods for Function 'MonthRevised' in Package 'RISmed' ~~
MonthRevised-methods | ~~ Methods for Function 'MonthRevised' in Package 'RISmed' ~~
myeloma | Example of results from 'EUtilsGet'

## -- N --

NlmUniqueID | Extracts 'NlmUniqueID' from 'Medline' object.
NlmUniqueID-method | ~~ Methods for Function 'NlmUniqueID' in Package 'RISmed' ~~
NlmUniqueID-methods | ~~ Methods for Function 'NlmUniqueID' in Package 'RISmed' ~~

## -- P --

PMID | Extracts 'PMID' from 'Medline' object.
PMID-method | ~~ Methods for Function 'PMID' in Package 'RISmed' ~~
PMID-methods | ~~ Methods for Function 'PMID' in Package 'RISmed' ~~
print-method | Print method for Medline object
print-method | Print method for EUtilsSummary object
print-methods | Print method for EUtilsSummary object
PublicationStatus | Extracts 'PublicationStatus' from 'Medline' object.
PublicationStatus-method | ~~ Methods for Function 'PublicationStatus' in Package 'RISmed' ~~
PublicationStatus-methods | ~~ Methods for Function 'PublicationStatus' in Package 'RISmed' ~~
PublicationType | Extracts 'PublicationType' from 'Medline' object.
PublicationType-method | ~~ Methods for Function 'PublicationType' in Package 'RISmed' ~~
PublicationType-methods | ~~ Methods for Function 'PublicationType' in Package 'RISmed' ~~

## -- Q --

Query | Extract 'Query' from 'Medline' object.
Query-method | ~~ Methods for Function 'Query' in Package 'RISmed' ~~
Query-methods | ~~ Methods for Function 'Query' in Package 'RISmed' ~~
QueryCount | Count of record results for EUtilsQuery
QueryCount-method | Count of record results for EUtilsQuery
QueryId | Get ids from EUtilsQuery
QueryId-method | Get ids from EUtilsQuery
QueryTranslation | Get the NCBI query translation from EUtilsQuery
QueryTranslation-method | Get the NCBI query translation from EUtilsQuery

## -- R --

RISmed | Download content from NCBI databases.

## -- S --

show-method | Show method for Medline object
show-method | Show method for EUtilsSummary object
show-methods | Show method for EUtilsSummary object
summary-method | Summary method for EUtilsSummary object
summary-methods | Summary method for EUtilsSummary object

## -- T --

Title | Extracts 'Title' from 'Medline' object.
Title-method | ~~ Methods for Function 'Title' in Package 'RISmed' ~~
Title-methods | ~~ Methods for Function 'Title' in Package 'RISmed' ~~

## -- V --

Volume | Extracts 'Volume' from 'Medline' object.
Volume-method | ~~ Methods for Function 'Volume' in Package 'RISmed' ~~
Volume-methods | ~~ Methods for Function 'Volume' in Package 'RISmed' ~~

## -- Y --

YearAccepted | Extracts 'YearAccepted' from 'Medline' object.
YearAccepted-method | ~~ Methods for Function 'YearAccepted' in Package 'RISmed' ~~
YearAccepted-methods | ~~ Methods for Function 'YearAccepted' in Package 'RISmed' ~~
YearArticleDate | Extracts 'YearArticleDate' from 'Medline' object.
YearArticleDate-method | ~~ Methods for Function 'YearArticleDate' in Package 'RISmed' ~~
YearArticleDate-methods | ~~ Methods for Function 'YearArticleDate' in Package 'RISmed' ~~
YearEntrez | Extracts 'YearEntrez' from 'Medline' object.
YearEntrez-method | ~~ Methods for Function 'YearEntrez' in Package 'RISmed' ~~
YearEntrez-methods | ~~ Methods for Function 'YearEntrez' in Package 'RISmed' ~~
YearEpublish | Extracts 'YearEpublish' from 'Medline' object.
YearEpublish-method | ~~ Methods for Function 'YearEpublish' in Package 'RISmed' ~~
YearEpublish-methods | ~~ Methods for Function 'YearEpublish' in Package 'RISmed' ~~
YearMedline | Extracts 'YearMedline' from 'Medline' object.
YearMedline-method | ~~ Methods for Function 'YearMedline' in Package 'RISmed' ~~
YearMedline-methods | ~~ Methods for Function 'YearMedline' in Package 'RISmed' ~~
YearPmc | Extracts 'YearPmc' from 'Medline' object.
YearPmc-method | ~~ Methods for Function 'YearPmc' in Package 'RISmed' ~~
YearPmc-methods | ~~ Methods for Function 'YearPmc' in Package 'RISmed' ~~
YearPpublish | Extracts 'YearPpublish' from 'Medline' object.
YearPpublish-method | ~~ Methods for Function 'YearPpublish' in Package 'RISmed' ~~
YearPpublish-methods | ~~ Methods for Function 'YearPpublish' in Package 'RISmed' ~~
YearPubDate | Extracts 'YearPubDate' from 'Medline' object.
YearPubDate-method | ~~ Methods for Function 'YearPubDate' in Package 'RISmed' ~~
YearPubDate-methods | ~~ Methods for Function 'YearPubDate' in Package 'RISmed' ~~
YearPubmed | Extracts 'YearPubmed' from 'Medline' object.
YearPubmed-method | ~~ Methods for Function 'YearPubmed' in Package 'RISmed' ~~
YearPubmed-methods | ~~ Methods for Function 'YearPubmed' in Package 'RISmed' ~~
YearReceived | Extracts 'YearReceived' from 'Medline' object.
YearReceived-method | ~~ Methods for Function 'YearReceived' in Package 'RISmed' ~~
YearReceived-methods | ~~ Methods for Function 'YearReceived' in Package 'RISmed' ~~
YearRevised | Extracts 'YearRevised' from 'Medline' object.
YearRevised-method | ~~ Methods for Function 'YearRevised' in Package 'RISmed' ~~
YearRevised-methods | ~~ Methods for Function 'YearRevised' in Package 'RISmed' ~~