Bass_ind_RKsolver       Solves the Seabass bioenergetic balance with a
                        4th order Runge Kutta method
Bass_ind_dataloader     Function that loads forcings data for Seabass
                        individual bioenergetic model and performs the
                        interpolation
Bass_ind_equations      Seabass bioenergetic individual model
                        differential equations
Bass_ind_main           Seabass bioenergetic individual model
Bass_ind_post           Seabass bioenergetic individual model
                        postprocessor
Bass_ind_pre            Seabass bioenergetic individual model
                        preprocessor
Bass_ind_skeleton       Creates the folders structure for Seabass
                        individual bioenergetic model
Bass_pop_RKsolver       Solves the Seabass population bioenergetic
                        balance with a 4th order Runge Kutta method
Bass_pop_dataloader     Function that loads forcings data for Seabass
                        population model and performs the interpolation
Bass_pop_equations      Seabass bioenergetic population model
                        differential equations
Bass_pop_loop           Function that runs the Monte Carlo simulation
                        for the Seabass population model
Bass_pop_main           Seabass bioenergetic population model
Bass_pop_post           Postprocess the Seabass population bioenergetic
                        model results
Bass_pop_pre            Seabass bioenergetic population model
                        preprocessor
Bass_pop_skeleton       Creates the folders structure for Seabass
                        population model
Bass_spatial_RKsolver   Solves the Seabass bioenergetic balance with a
                        4th order Runge Kutta method - used in
                        spatialized model
Bass_spatial_dataloader
                        Function that loads forcings data for Bass
                        spatialized model and performs the
                        interpolation
Bass_spatial_loop       Bass bioenergetic spatialized model -
                        spatialization loop
Bass_spatial_main       Bass bioenergetic spatialized model -
                        spatialization loop
Bass_spatial_post       Postprocess the Mussel spatialized model
                        results
Bass_spatial_pre        Bass bioenergetic spatialized model
                        preprocessor
Bass_spatial_pre_int    Bass bioenergetic spatialized model
                        preprocessor - used inside spatialization loop
Bass_spatial_skeleton   Creates the folders structure for Bass
                        spatialized model
Bream_ind_RKsolver      Solves the Seabream individual bioenergetic
                        balance with a 4th order Runge Kutta method
Bream_ind_dataloader    Function that loads forcings data for Seabream
                        individual bioenergetic model and performs the
                        interpolation
Bream_ind_equations     Seabream bioenergetic individual model
                        differential equations
Bream_ind_main          Seabream bioenergetic individual model
Bream_ind_post          Postprocess the Seabream indivual bioenergetic
                        model results
Bream_ind_pre           Seabream bioenergetic individual model
                        preprocessor
Bream_ind_skeleton      Creates the folders structure for Seabream
                        individual bioenergetic model
Bream_pop_RKsolver      Solves the Seabream population bioenergetic
                        balance with a 4th order Runge Kutta method
Bream_pop_dataloader    Function that loads forcings data for Seabream
                        population model and performs the interpolation
Bream_pop_equations     Seabream bioenergetic population model
                        differential equations
Bream_pop_loop          Function that runs the Monte Carlo simulation
                        for the Seabream population model
Bream_pop_main          Seabream bioenergetic population model
Bream_pop_post          Postprocess the Bream population bioenergetic
                        model results
Bream_pop_pre           Seabream bioenergetic population model
                        preprocessor
Bream_pop_skeleton      Creates the folders structure for Seabream
                        population model
Bream_spatial_RKsolver
                        Solves the Seabream bioenergetic balance with a
                        4th order Runge Kutta method - used in
                        spatialized model
Bream_spatial_dataloader
                        Function that loads forcings data for Bream
                        spatialized model and performs the
                        interpolation
Bream_spatial_loop      Bream bioenergetic spatialized model -
                        spatialization loop
Bream_spatial_main      Bream bioenergetic spatialized model -
                        spatialization loop
Bream_spatial_post      Postprocess the Bream spatialized model results
Bream_spatial_pre       Bream bioenergetic spatialized model
                        preprocessor
Bream_spatial_pre_int   Bream bioenergetic spatialized model
                        preprocessor - used inside spatialization loop
Bream_spatial_skeleton
                        Creates the folders structure for Bream
                        spatialized model
ClamF_ind_RKsolver      Solves the Clam bioenergetic balance
                        (alternative version) with a 4th order Runge
                        Kutta method
ClamF_ind_dataloader    Function that loads forcings data for Clam
                        individual bioenergetic model (alternative
                        version) and performs the interpolation
ClamF_ind_equations     Clam bioenergetic individual model differential
                        equations (alternative version)
ClamF_ind_main          Clam bioenergetic individual model (alternative
                        version)
ClamF_ind_post          Postprocess the Clam indivual bioenergetic
                        model (alternative version) results
ClamF_ind_pre           Clam bioenergetic individual model preprocessor
                        (alternativer version)
ClamF_ind_skeleton      Creates the folders structure for Clam
                        individual bioenergetic model (alternative
                        version)
ClamF_pop_RKsolver      Solves the Clam bioenergetic balance
                        (alternative version) with a 4th order Runge
                        Kutta method
ClamF_pop_dataloader    Function that loads forcings data for Clam
                        population model (alternative version) and
                        performs the interpolation
ClamF_pop_equations     Clam bioenergetic population model differential
                        equations (alternative version)
ClamF_pop_loop          Function that runs the Monte Carlo simulation
                        for the Clam population model (alternative
                        version)
ClamF_pop_main          Clam bioenergetic population model (alternative
                        version)
ClamF_pop_post          Postprocess the Clam population bioenergetic
                        model results (alternative model)
ClamF_pop_pre           Clam bioenergetic population model (alternative
                        version) preprocessor
ClamF_pop_skeleton      Creates the folders structure for Clam
                        population model (alternative version)
Clam_ind_dataloader     Function that loads forcings data for Clam
                        individual bioenergetic model and performs the
                        interpolation
Clam_ind_equations      Clam bioenergetic individual model differential
                        equations
Clam_ind_main           Clam bioenergetic individual model
Clam_ind_post           Postprocess the Clam individual bioenergetic
                        model results
Clam_ind_pre            Clam bioenergetic individual model preprocessor
Clam_ind_skeleton       Creates the folders structure for Clam
                        individual bioenergetic model
Clam_pop_RKsolver       Solves the Clam bioenergetic balance for
                        population with a 4th order Runge Kutta method
Clam_pop_dataloader     Function that loads forcings data for Clam
                        population model and performs the interpolation
Clam_pop_equations      Clam bioenergetic population model differential
                        equations
Clam_pop_loop           Function that runs the Monte Carlo simulation
                        for the Clam population model
Clam_pop_main           Clam bioenergetic population model
Clam_pop_post           Postprocess the Clam population bioenergetic
                        model results
Clam_pop_pre            Clam bioenergetic population model preprocessor
Clam_pop_skeleton       Creates the folders structure for Clam
                        population model
Mussel_ind_RKsolver     Solves the Mussel individual bioenergetic
                        balance with a 4th order Runge Kutta method
Mussel_ind_dataloader   Function that loads forcings data for Mussel
                        individual bioenergetic model and performs the
                        interpolation
Mussel_ind_equations    Mussel bioenergetic individual model
                        differential equations
Mussel_ind_main         Mussel bioenergetic individual model
Mussel_ind_post         Postprocess the Mussel indivual bioenergetic
                        model results
Mussel_ind_pre          Mussel bioenergetic individual model
                        preprocessor
Mussel_ind_skeleton     Creates the folders structure for Mussel
                        individual bioenergetic model
Mussel_pop_RKsolver     Solves the Mussel population bioenergetic
                        balance with a 4th order Runge Kutta method
Mussel_pop_dataloader   Function that loads forcings data for Mussel
                        population model and performs the interpolation
Mussel_pop_equations    Mussel bioenergetic population model
                        differential equations
Mussel_pop_loop         Function that runs the Monte Carlo simulation
                        for the Mussel population model
Mussel_pop_main         Mussel bioenergetic population model
Mussel_pop_post         Postprocess the Mussel population bioenergetic
                        model results
Mussel_pop_pre          Mussel bioenergetic population model
                        preprocessor
Mussel_pop_skeleton     Creates the folders structure for Mussel
                        population model
Mussel_spatial_RKsolver
                        Solves the Mussel individual bioenergetic
                        balance with a 4th order Runge Kutta method for
                        spatialized model
Mussel_spatial_dataloader
                        Function that loads forcings data for Mussel
                        spatialized model and performs the
                        interpolation
Mussel_spatial_loop     Mussel bioenergetic spatialized model -
                        spatialization loop
Mussel_spatial_main     Mussel bioenergetic spatialized model -
                        spatialization loop
Mussel_spatial_post     Postprocess the Mussel spatialized model
                        results
Mussel_spatial_pre      Mussel bioenergetic spatialized model
                        preprocessor
Mussel_spatial_pre_int
                        Mussel bioenergetic spatialized model
                        preprocessor - used inside spatialization loop
Mussel_spatial_skeleton
                        Creates the folders structure for Mussel
                        spatialized model
Pop_fun                 Function that solves the population dynamics
                        equations including discontinuities
clam_ind_RKsolver       Solves the Clam individual bioenergetic balance
                        with a 4th order Runge Kutta method
