[[,MultiPlate-method    Subsetting method for MultiPlate
add_DB                  Add double blank (DB) to a plate
add_DQC                 Add dilution quality control (DQC) to the plate
add_QC                  Add quality control samples to the plate
add_blank               Add blank to the plate Can be either double
                        blank (DB), CS0IS+ or CS+IS0
add_cs_curve            Add calibration curve to the plate
add_samples             Add samples to plate with pharmacokinetic
                        attributes
add_samples_db          Add samples from the sample log to the plate
add_samples_db2         Add samples from the sample log to the plate
                        with multiplication
add_suitability         Add suitability sample to the plate
area_report.PeakRes     gt table of areas
calc_var_summary        Calculate Summary Statistics for Each
                        Concentration Level For Either Concentration,
                        Area, or Area Ratio
check_chrom_cmpds       Check Matching of Compound and Transitions in
                        chrom_res and method database
chrom_app               chrom_apps
combine_injec_lists     Create Sample List with rigorous design
combine_plates          Combine plates in MultiPlate object
config_suitability      Configure suitability runs
create_new_study        Create a new study in the database
cv                      Calculate Coefficient of variation
download_sample_list    Download sample list from database to local
                        spreadsheet with vendor specific format
estim_dil_limit         Estimate Dilution Limit Based on Additive and
                        Proportional Errors and LLOQ
estim_lloq              Estimate LLOQ From Existing Additive and
                        Proportional errors
export_integration      Export Expected RT
export_pk_profiles      Export PK profiles for a given compound in a
                        specified format Currently supports "nonmem"
                        format. The exported file will include a CSV
                        with the PK data and an Excel file with the
                        codebook.
export_run              Export run
extract_peak_bounds     Extract Peak Boundaries
fill_scheme             Filling orientation of the plate
filter_chrom            title Filter Chromatogram Peaks
fit_var                 Estimate Additive and proportional errors from
                        calibration data
formated_print          Format and print the results of fit_var
generate_96             Generate 96 well plate
get_compound_ID         Find Compound ID from compound Name
get_sample_ID           Find Sample ID from sample Name
get_sample_names        Find sample names for all samples
has_default_bounds      check if default expected RT is set for a
                        compound
install_py_dep          Install Python dependencies for PKbioanalysis
integrate               integrate Peak with trapzoid method given start
                        and end
is_integrated           Check if peak was integrated for a specific
                        compound
is_smoothed             Return an indicator if the chromatogram is
                        smoothed
length,MultiPlate-method
                        Length method for MultiPlate
make_calibration_study
                        Create a calibration study with calibration
                        standards and QCs
make_metabolic_study    Create a metabolic study layout
nca_table               Calculate Cmax, Tmax and AUC for each subject
                        given a compound's PK profiles
pkmerge                 Merge PK profiles into QuantRes object
plate_metadata          Set plate description
plate_tree              Plot the design of the plate
plot.PlateObj           Plotting 96 well plate
plot_RT.ChromRes        Plotting RT intervals of chromatogram
plot_RT.PeakRes         Plot RT
plot_chrom              Plot Chromatogram per Sample for Selected
                        transitions
plot_peak_areas.PeakRes
                        Plot peak areas
plot_var_pattern        Plot Relationship Between Concentration and
                        CV/SD
precision_per_vial      Precision per vial
prefilter_precision_data
                        Filter data
quant_app               Quantification App
read_chrom              Read Chromatogram Files
read_experiment_results
                        Read experiment results
register_plate          This will save the plate to the database
response_to_conc        Convert response to concentration
reverse_predict         Reverse predict concentration from response
run_summary             Get Summary of an object
smooth_chrom            Smooth Chromatogram Peaks
study_app               bioanalytic_app
update_RT               Manually Update Observed RT for either all
                        compounds, all next samples, or single compound
                        and sample
write_injec_seq         Write injection sequence to database
