R: Miscellaneous Functions for Passive Acoustic Analysis

# Miscellaneous Functions for Passive Acoustic Analysis

## Documentation for package ‘PAMmisc’ version 1.13.0

- DESCRIPTION file
- Package NEWS
- Package README

## Help Pages

addPgAnno | Add Spectrogram Annotations to Pamguard Database
addPgEvent | Add Pamguard Event to Database
addPgGps | Add GPS to a Pamguard Database
browseEdinfo | Browse a List of Environmental Datasets
createAMWave | Write Amplitude Modulated Waveform
createClickWave | Write Click Waveform
createSSP | Create Sound Speed Profiles
dataToRanges | Create List of the Ranges of Coordinates
decimateWavFiles | Decimate Wave Files
downloadEnv | Download Environmental Data
edinfoToURL | Create a URL for Downloading Data from a edinfo Object
erddapList | A list of edinfo objects from ERDDAP data sources
erddapToEdinfo | Create an edinfo Object from an ERDDAP Dataset Id
fastReadWave | Load Wave File
findEchoTimes | Find Estimated Echo Times
formatURL | Format URL for Environmental Data Download
getEdinfo | Browse a List of Curated Environmental Datasets
getFigshareInfo | getFigshareInfo
hycomList | A list of edinfo objects from HYCOM data sources
hycomToEdinfo | Create an edinfo Object from an ERDDAP Dataset Id
matchEnvData | Match Data From an Existing Netcdf File or Download and Match
matchEnvData-method | Match Data From an Existing Netcdf File or Download and Match
ncToData | Match Data From a Netcdf File
peakTrough | Find Peaks and Troughs in a Spectrum
plotPresBar | plotPresBar
plotPresGrid | plotPresGrid
processSoundtrapLogs | Perform QA/QC on Soundtrap Files
pwelch | Estimate Power Spectral Density Using Welch's Method
raytrace | Raytrace Through a Soundspeed Profile
readGPXTrack | Read Tracks from a GPX File
readSpecAnno | Read Pamguard Spectrogram Annotation Table
soundtrapQAQC | Perform QA/QC on Soundtrap Files
squishList | Compress a List by Name
straightPath | Mark Straight Path Segments in GPS Track
trainSplitPermute | trainSplitPermute
updateUID | Update Detection UIDs
varSelect | Utility for Selecting Variables to Download
wignerTransform | Calculate the Wigner-Ville Transform of a Signal
writeAMWave | Write Amplitude Modulated Waveform
writeClickWave | Write Click Waveform