R: Estimating Oncogenetic Trees

# Estimating Oncogenetic Trees

## Documentation for package ‘Oncotree’ version 0.3.5

- DESCRIPTION file
- User guides, package vignettes and other documentation

## Help Pages

Oncotree-package | Constructing and evaluating oncogenetic trees
ancestors | Find ancestors within an oncogenetic tree.
bootstrap.oncotree | Bootstrap an oncogenetic tree to assess stability
distribution.oncotree | Find the event distribution defined by an oncogenetic tree
error.rates<- | Set the error rates of an oncotree manually
generate.data | Generate random data from an oncogenetic tree
least.common.ancestor | Find ancestors within an oncogenetic tree.
marginal.distr | Find the event distribution defined by an oncogenetic tree
Oncotree | Constructing and evaluating oncogenetic trees
oncotree.fit | Build and display an oncogenetic tree
ov.cgh | Ovarian cancer CGH data
plot.boottree | Bootstrap an oncogenetic tree to assess stability
plot.oncotree | Build and display an oncogenetic tree
print.boottree | Bootstrap an oncogenetic tree to assess stability
print.oncotree | Build and display an oncogenetic tree
pstree.oncotree | Build and display an oncogenetic tree