R: Nondetects and Data Analysis for Environmental Data

# Nondetects and Data Analysis for Environmental Data

## Documentation for package ‘NADA’ version 1.6-1.2

- DESCRIPTION file

## Help Pages

A B C D F G H L M N O P Q R S T misc

## -- A --

Ag | Silver-standard concentrations
Arsenic | Dissolved arsenic concentrations in ground water of U.S.
As | Dissolved arsenic concentrations in ground water of U.S.
AsExample | Example arsenic concentrations in drinking water
asSurv | Methods for function asSurv in Package NADA
asSurv-method | Methods for function asSurv in Package NADA
asSurv-methods | Methods for function asSurv in Package NADA
Atra | Atrazine concentrations in Nebraska ground water
AtraAlt | Atrazine concentrations in Nebraska ground water - Alternative
Atrazine | Atrazine concentrations in Nebraska ground water - Another Format

## -- B --

Bloodlead | Lead concentrations in the blood of herons in Virginia.
boxplot,ros | Methods for function boxplot in Package NADA
boxplot-method | Methods for function boxplot in Package NADA
boxplot-methods | Methods for function boxplot in Package NADA

## -- C --

Cadmium | Cadmium concentrations in fish
Cen | Create a Censored Object
cenboxplot | Produces a censored boxplot
cendiff | Test Censored ECDF Differences
cendiff-method | Methods for function cendiff in Package NADA
cendiff-methods | Methods for function cendiff in Package NADA
cenfit | Compute an ECDF for Censored Data
cenfit-class | Class "cenfit"
cenfit-method | Methods for function cenfit in Package NADA
cenfit-methods | Methods for function cenfit in Package NADA
cenken | Compute Kendall's tau correlation coefficient and associated line for censored data. Computes the Akritas-Theil-Sen nonparametric line, with the Turnbull estimate of intercept.
cenken-class | Class "cenken"
cenken-method | Methods for function cenken in Package NADA
cenken-methods | Methods for function cenken in Package NADA
cenmle | Regression by Maximum Likelihood Estimation for Left-censored Data
cenmle-class | Class "cenmle"
cenmle-gaussian | Class "cenmle"
cenmle-gaussian-class | Class "cenmle-gaussian"
cenmle-lognormal | Class "cenmle"
cenmle-lognormal-class | Class "cenmle-lognormal"
cenmle-method | Methods for function cenmle in Package NADA
cenmle-methods | Methods for function cenmle in Package NADA
cenreg | Compute regression equations and likelihood correlation coefficient for censored data.
cenreg-class | Class "cenreg"
cenreg-gaussian | Class "cenreg"
cenreg-gaussian-class | Class "cenreg-gaussian"
cenreg-lognormal | Class "cenreg"
cenreg-lognormal-class | Class "cenreg-lognormal"
cenreg-method | Methods for function cenreg in Package NADA
cenreg-methods | Methods for function cenreg in Package NADA
cenros | Regression on Order Statistics
censtats | Produces summary statistics using ROS, MLE, and K-M methods.
censummary | Produces basic summary statistics on censored data
censummary-method | Methods for function censummary in Package NADA
censummary-methods | Methods for function censummary in Package NADA
cenxyplot | Produces a censored x-y scatter plot
ChlfmCA | Chloroform concentrations in California groundwater.
coef-method | Methods for function coef in package NADA
coef-methods | Methods for function coef in package NADA
coefficents-methods | Methods for function coef in package NADA
cor | Methods for function cor in Package NADA
cor-method | Methods for function cor in Package NADA
cor-methods | Methods for function cor in Package NADA
CuZn | Copper and zinc concentrations in ground water
CuZnAlt | Zinc concentrations of the CuZn data set

## -- D --

DFe | Dissolved iron concentrations from the Brazos River, USA
DOC | DOC in ground water

## -- F --

flip | Methods for function flip in Package NADA
flip-method | Methods for function flip in Package NADA
flip-methods | Methods for function flip in Package NADA

## -- G --

Golden | Blood lead in organs of herons from Virginia

## -- H --

Hatchery | Antibiotic concentrations in fish-hatchery drainage
hc.ppoints | Helsel-Cohn style plotting positions
hc.ppoints.cen | Helsel-Cohn style plotting positions
hc.ppoints.uncen | Helsel-Cohn style plotting positions
HgFish | Mercury concentrations in fish across the United States.

## -- L --

lines-method | Methods for function lines in Package NADA
lines-methods | Methods for function lines in Package NADA
lros | Regression on Order Statistics

## -- M --

MDCu | Copper in ground water from of San Joaquin Valley, USA
mean-method | Methods for function mean in Package NADA
mean-methods | Methods for function mean in Package NADA
median-method | Methods for function median in Package NADA
median-methods | Methods for function median in Package NADA

## -- N --

NADA.As | Dissolved arsenic concentrations in ground water of U.S.
NADAList-class | Class "NADAList"
NADAprobs | Methods for function quantile in Package NADA

## -- O --

Oahu | Arsenic concentrations in Manoa Stream, Oahu Hawaii

## -- P --

pctCen | Calculate the percentage of values censored
pexceed | Methods for function predict in package NADA
pexceed-method | Methods for function predict in package NADA
plot-method | Methods for function plot in Package NADA
plot-methods | Methods for function plot in Package NADA
predict | Methods for function predict in package NADA
predict-method | Methods for function predict in package NADA
predict-methods | Methods for function predict in package NADA
print-method | Methods for function print in Package NADA
print-methods | Methods for function print in Package NADA

## -- Q --

quantile-method | Methods for function quantile in Package NADA
quantile-methods | Methods for function quantile in Package NADA

## -- R --

Recon | Atrazine in streams of the Midwestern U.S.
residuals-method | Methods for function residuals in package NADA
residuals-methods | Methods for function residuals in package NADA
Roach | Lindane in fish from tributaries of the Thames River, UK
ros | Regression on Order Statistics
ros-class | Class "ros"
ros-method | Methods for function ros in Package NADA
ros-methods | Methods for function ros in Package NADA

## -- S --

sd-method | Methods for function sd in Package NADA
sd-methods | Methods for function sd in Package NADA
SedPb | Lead in stream sediments before and after wildfires
ShePyrene | Pyrene concentrations in water from Puget Sound, WA USA
show-method | Methods for function show in Package NADA
show-methods | Methods for function show in Package NADA
Silver | Dissolved silver concentrations from water analyses
splitQual | Split character qualifiers and numeric values from qualified data
summary-method | Methods for function summary in Package 'NADA'
summary-methods | Methods for function summary in Package 'NADA'
summary.cenreg | Class "summary.cenreg"
summary.cenreg-class | Class "summary.cenreg"

## -- T --

Tbl1one | Contaminant concentrations in test and a control group
TCE | TCE in ground waters of Long Island, New York
TCEReg | TCE ground waters of Long Island - with explanatory variables
Thames | Dieldrin, lindane and PCB in fish of the Thames River, UK

## -- misc --

[-method | Class "cenfit"