Package: MonoPhy
Type: Package
Title: Explore Monophyly of Taxonomic Groups in a Phylogeny
Version: 1.3.2
Date: 2024-10-16
Authors@R: c(person("Orlando", "Schwery", role=c("aut", "cre"), email="schwery.macroevo@pm.me"),
             person("Brian C.", "O'Meara", role=c("aut", "ctb")),
             person("Peter", "Cowman", role=c("ctb")))
Description: Requires rooted phylogeny as input and creates a table of genera, their monophyly-status, which taxa cause problems in monophyly etc. Different information can be extracted from the output and a plot function allows visualization of the results in a number of ways. 
 "MonoPhy: a simple R package to find and visualize monophyly issues." Schwery, O. & O'Meara, B.C. (2016) <doi:10.7717/peerj-cs.56>.
Depends: ape, phytools
Imports: phangorn, RColorBrewer
License: GPL-3
Suggests: knitr, testthat, paleotree, rmarkdown, taxize
VignetteBuilder: knitr
NeedsCompilation: no
Packaged: 2024-10-16 23:32:37 UTC; oschwery
Author: Orlando Schwery [aut, cre],
  Brian C. O'Meara [aut, ctb],
  Peter Cowman [ctb]
Maintainer: Orlando Schwery <schwery.macroevo@pm.me>
Repository: CRAN
Date/Publication: 2024-10-17 11:40:07 UTC
Built: R 4.6.0; ; 2026-04-28 07:07:47 UTC; unix
