Package: KOGMWU
Type: Package
Title: Functional Summary and Meta-Analysis of Gene Expression Data
Version: 1.2
Date: 2019-02-19
Author: Mikhail V. Matz
Maintainer: Mikhail V. Matz <matz@utexas.edu>
Description: Rank-based tests for enrichment of KOG (euKaryotic Orthologous Groups) classes with up- or down-regulated genes based on a continuous measure. The meta-analysis is based on correlation of KOG delta-ranks across datasets (delta-rank is the difference between mean rank of genes belonging to a KOG class and mean rank of all other genes). With binary measure (1 or 0 to indicate significant and non-significant genes), one-tailed Fisher's exact test for over-representation of each KOG class among significant genes will be performed. 
License: GPL-3
Depends: R (>= 2.10), pheatmap
NeedsCompilation: no
Packaged: 2019-02-19 18:30:06 UTC; c-monstr
Repository: CRAN
Date/Publication: 2019-02-19 19:00:03 UTC
Built: R 4.6.0; ; 2026-04-27 17:57:27 UTC; unix
