R: Operating on Integer-Bounded Intervals

# Operating on Integer-Bounded Intervals

## Documentation for package ‘IntervalSurgeon’ version 1.3

- DESCRIPTION file
- User guides, package vignettes and other documentation

## Help Pages

IntervalSurgeon-package | Operating on Integer-Bounded Intervals
annotate | Annotate one set of intervals with the names of those which intersect with the other
breaks | Get break points for set of intervals
covered | Determine whether each interval in a given set are intersected/covered by intervals in another set
depth | Depth of piled intervals
detached_sorted_nonempty | Check intervals are detached, sorted and non-empty.
flatten | Flatten a set of intervals
intersected | Determine whether each interval in a given set are intersected/covered by intervals in another set
intersects | Compute overlaps of two sets of detached and sorted intervals
IntervalSurgeon | Operating on Integer-Bounded Intervals
join | Get all overlapping tuples of intervals from multiple sets
overlaps | Compute overlaps of two sets of detached and sorted intervals
pile | Get IDs of intervals covering each sub-interval
proportion_overlap | Calculate proportion overlapping of intersecting intervals
sections | Get the sections from a set of interval breaks
setdiffs | Compute overlaps of two sets of detached and sorted intervals
stitch | Stich together touching intervals and remove empty intervals
unions | Compute overlaps of two sets of detached and sorted intervals