Package: IgAScores
Title: Score Taxon-Level IgA Binding in IgA-Seq Experiments
Version: 0.1.2
Authors@R: 
    person(given = "Matthew",
           family = "Jackson",
           role = c("aut", "cre","cph"),
           email = "mattjackson4@gmail.com")
Description: Functions to calculate indices used to score immunoglobulin A (IgA) binding of bacteria in IgA sequencing (IgA-Seq) experiments.
  This includes the original Kau and Palm indices and more recent methods as described in Jackson et al. (2020) <doi:10.1101/2020.08.19.257501>.
  Additionally the package contains a function to simulate IgA-Seq data and an example experimental data set for method testing. 
Depends: R (>= 3.5.0)
Suggests: knitr, markdown
URL: https://doi.org/10.1101/2020.08.19.257501
VignetteBuilder: knitr
License: GPL-3
Encoding: UTF-8
RoxygenNote: 7.1.1
NeedsCompilation: no
Packaged: 2020-08-26 13:27:05 UTC; majackson
Author: Matthew Jackson [aut, cre, cph]
Maintainer: Matthew Jackson <mattjackson4@gmail.com>
Repository: CRAN
Date/Publication: 2020-09-01 08:10:09 UTC
Built: R 4.6.0; ; 2026-04-26 20:07:58 UTC; unix
