Package: IDSL.FSA
Type: Package
Title: Fragmentation Spectra Analysis (FSA)
Version: 1.2
Authors@R: c(
    person(family = "Fakouri-Baygi", given = "Sadjad", email = "sadjad.fakouri-baygi@mssm.edu",
    role = "aut", comment = c(ORCID = "0000-0002-6864-6911")),
    person(family = "Barupal", given = "Dinesh", email = "dinesh.barupal@mssm.edu", role = c("cre","aut"),
           comment = c(ORCID = "0000-0002-9954-8628")))
Depends: R (>= 4.0)
Suggests: readxl
Author: Sadjad Fakouri-Baygi [aut] (<https://orcid.org/0000-0002-6864-6911>),
  Dinesh Barupal [cre, aut] (<https://orcid.org/0000-0002-9954-8628>)
Maintainer: Dinesh Barupal <dinesh.barupal@mssm.edu>
Description: The 'IDSL.FSA' package was designed to annotate standard .msp (mass spectra format) and .mgf (Mascot generic format) files using mass spectral entropy similarity, dot product (cosine) similarity, and normalized Euclidean mass error (NEME) followed by intelligent pre-filtering steps for rapid spectra searches. 'IDSL.FSA' also provides a number of modules to convert and manipulate .msp and .mgf files. The 'IDSL.FSA' workflow was integrated in the 'IDSL.CSA' and 'IDSL.NPA' packages introduced in <doi:10.1021/acs.analchem.3c00376>.
License: MIT + file LICENSE
URL: https://github.com/idslme/idsl.fsa
BugReports: https://github.com/idslme/idsl.fsa/issues
Encoding: UTF-8
Archs: i386, x64
NeedsCompilation: no
Packaged: 2023-06-27 21:27:09 UTC; sfbaygi
Repository: CRAN
Date/Publication: 2023-06-29 14:10:02 UTC
Built: R 4.6.0; ; 2026-04-26 20:05:50 UTC; unix
