R: Individual Based Model Population Simulation

# Individual Based Model Population Simulation

## Documentation for package ‘IBMPopSim’ version 1.1.0

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

IBMPopSim-package | IBMPopSim: Individual Based Model Population Simulation
add_characteristic | Generic method for add_characteristic
add_characteristic.population | Add characteristic to a population
age_pyramid | Generic method for age_pyramid
age_pyramid.population | Age pyramid from a population at a given time.
age_pyramids | Generic method for age_pyramids
age_pyramids.population | Age pyramid from a population data frame at some given times.
check_intensity_code | Check the intensity code.
check_interaction_code | Check the interaction code.
check_kernel_code | Check the kernel code.
compatibility_chars_events | Check characteristics-events compatibility
compatibility_pop_model | Check population-model compatibility
death_table | Death table
EWdata_hmd | England and Wale mortality data (source: Human Mortality Database)
EW_popIMD_14 | England and Wales (EW) 2014 population and death rates by Index of Multiple Deprivation (IMD).
EW_pop_14 | England and Wales (EW) 2014 population, death and birth rates.
EW_pop_out | Example of "human population" after 100 years of simulation.
exposure_table | Exposure table
get_characteristics | Generic method for get_characteristics
get_characteristics.population | Returns names and C types of the characteristics.
gompertz | Gompertz–Makeham intensity function.
IBMPopSim | IBMPopSim: Individual Based Model Population Simulation
linfun | Linear interpolation function.
max.stepfun | Returns the maximum of a function of class 'stepfun'.
merge_pop_withid | A function returning a merged dataframe from a list of population dataframes with id.
mk_event_individual | Creating an event with intensity of class individual
mk_event_inhomogeneous_poisson | Creating inhomogeneous Poisson class event
mk_event_interaction | Creating an event with intensity of type interaction
mk_event_poisson | Creating Poisson class event
mk_model | Creates a model for IBMPopSim.
piecewise_x | Piecewise real function.
piecewise_xy | Piecewise real function of two variables.
plot.population | Plot the age pyramid of a population data frame (at a given time).
plot.pyramid | Plot an age pyramid.
popsample | Generic method for popsample
popsample.pyramid | Sample a population from an age pyramid (at a given time).
popsim | Simulation of a model.
population | Class population
population_alive | Generic method for population_alive
population_alive.population | Returns a population of individuals alive.
print.event | Print Event
print.model | Printing of a model
print.population | Printing population
pyramid | Class pyramid
stepfun | Step Function.
summary.event | Summarizing an event
summary.logs | Summary logs
summary.model | Summary of a model
summary.population | Summary population
summary.simulation_output | Summary simulation output
toy_params | Toy parameters for IBMPopSim-human_popIMD vignette example.
weibull | Weibull function.