GiANT                   Enrichment analysis
countdata               Example data
createSummaryTable      Create an overview table for an analysis
evaluateGeneSetUncertainty
                        Quantify gene set uncertainty
filterGeneSets          Filtering of gene sets
geneSetAnalysis         Main interface for enrichment analyses.
global                  Global analyses
gls                     Gene-level statistics
gsAnalysis              Gene set analysis.
gss                     Gene set statistics
hist.gsaResult          Null distribution histogram and statistic of
                        the input set for enrichment analyses.
labels                  Example data to label samples in countdata
                        (rows) in two classes 0 and 1
mergeProbesForGenes     Merge multiple probes for one gene
parseGmt                Venn Euler Diagramm
pathways                Example data for pathways to to gene set
                        enrichtment analyses
plot.uncertaintyResult
                        Plots the results of an uncertainty analysis.
plotOverrepresentation
                        Plot overlap of gene sets and core set
predefinedAnalyses      Predefined enrichment analyses
preprocessGeneSets      Eliminate unknown genes from gene sets
significance            Significance assessment
summary.gsaResult       Summarize gene set analysis results
transformation          Transformations
