Package: GenoTriplo
Type: Package
Title: Genotyping Triploids (or Diploids) from Luminescence Data
Version: 1.1.3
Authors@R: 
  c(person(given = "Julien",
           family = "Roche",
           role = c("aut", "cre"),
           email = "julien.roche@inrae.fr"),
    person(given = "Florence",
           family = "Phocas",
           role = "aut"),
    person(given = "Mathieu",
           family = "Besson",
           role = "aut"),
    person(given = "Pierre",
           family = "Patrice",
           role = "aut"),
    person(given = "Marc",
           family = "Vandeputte",
           role = "aut"),
    person(given = "François",
           family = "Allal",
           role = "aut"),
    person(given = "Pierrick",
           family = "Haffray",
           role = "aut"))
Description: Genotyping of triploid individuals from luminescence data (marker probeset A and B). Works also for diploids.
	Two main functions: Run_Clustering() that regroups individuals with a same genotype based on proximity and
	Run_Genotyping() that assigns a genotype to each cluster. For Shiny interface use: launch_GenoShiny().
License: GPL
Encoding: UTF-8
LazyData: true
RoxygenNote: 7.3.2
Imports: cowplot, doParallel, dplyr, DT, foreach, ggplot2, htmltools,
        parallel, processx, rlang, Rmixmod, shiny, shinythemes, tidyr
Depends: R (>= 3.5.0), shinyBS
NeedsCompilation: no
Packaged: 2025-03-25 10:14:48 UTC; Proprietaire
Author: Julien Roche [aut, cre],
  Florence Phocas [aut],
  Mathieu Besson [aut],
  Pierre Patrice [aut],
  Marc Vandeputte [aut],
  François Allal [aut],
  Pierrick Haffray [aut]
Maintainer: Julien Roche <julien.roche@inrae.fr>
Repository: CRAN
Date/Publication: 2025-03-25 16:40:02 UTC
Built: R 4.6.0; ; 2026-04-29 18:18:05 UTC; unix
